Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
NclP09405 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC23.53■■□□□ 1.36
NclP09405 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC23.53■■□□□ 1.36
NclP09405 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NclP09405 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NclP09405 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC23.53■■□□□ 1.36
NclP09405 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
NclP09405 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NclP09405 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NclP09405 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
NclP09405 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NclP09405 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NclP09405 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NclP09405 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NclP09405 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NclP09405 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
NclP09405 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC23.52■■□□□ 1.36
NclP09405 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC23.52■■□□□ 1.36
NclP09405 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC23.52■■□□□ 1.36
NclP09405 AC159106.1-201ENSMUST00000224421 690 ntBASIC23.52■■□□□ 1.36
NclP09405 AC117588.1-201ENSMUST00000228510 999 ntBASIC23.52■■□□□ 1.36
NclP09405 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NclP09405 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NclP09405 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC23.52■■□□□ 1.36
NclP09405 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
NclP09405 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NclP09405 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NclP09405 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
NclP09405 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC23.51■■□□□ 1.35
NclP09405 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NclP09405 Gm6184-201ENSMUST00000120403 1261 ntBASIC23.51■■□□□ 1.35
NclP09405 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC23.51■■□□□ 1.35
NclP09405 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NclP09405 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NclP09405 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NclP09405 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NclP09405 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NclP09405 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NclP09405 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NclP09405 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC23.51■■□□□ 1.35
NclP09405 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
NclP09405 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC23.5■■□□□ 1.35
NclP09405 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC23.5■■□□□ 1.35
NclP09405 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Gm8000-201ENSMUST00000188378 592 ntBASIC23.5■■□□□ 1.35
NclP09405 AC154222.1-201ENSMUST00000223882 475 ntBASIC23.5■■□□□ 1.35
NclP09405 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC23.5■■□□□ 1.35
NclP09405 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
NclP09405 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NclP09405 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
NclP09405 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
NclP09405 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
NclP09405 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NclP09405 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC23.49■■□□□ 1.35
NclP09405 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
NclP09405 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NclP09405 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NclP09405 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
NclP09405 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC23.49■■□□□ 1.35
NclP09405 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NclP09405 Gm27646-201ENSMUST00000183989 110 ntBASIC23.49■■□□□ 1.35
NclP09405 Gm27628-201ENSMUST00000184911 107 ntBASIC23.49■■□□□ 1.35
NclP09405 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
NclP09405 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NclP09405 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NclP09405 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
NclP09405 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NclP09405 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NclP09405 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC23.48■■□□□ 1.35
NclP09405 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NclP09405 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC23.48■■□□□ 1.35
NclP09405 AC132104.2-201ENSMUST00000215011 266 ntBASIC23.48■■□□□ 1.35
NclP09405 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NclP09405 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
NclP09405 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NclP09405 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NclP09405 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NclP09405 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
NclP09405 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
NclP09405 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
NclP09405 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
NclP09405 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
NclP09405 AC115863.1-201ENSMUST00000214815 1813 ntBASIC23.47■■□□□ 1.35
NclP09405 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NclP09405 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NclP09405 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC23.47■■□□□ 1.35
NclP09405 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms