Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gm5493S4R2D1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5493S4R2D1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5493S4R2D1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gm5493S4R2D1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5493S4R2D1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5493S4R2D1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5493S4R2D1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5493S4R2D1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Gm5493S4R2D1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm5493S4R2D1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm5493S4R2D1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5493S4R2D1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5493S4R2D1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5493S4R2D1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5493S4R2D1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5493S4R2D1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm5493S4R2D1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5493S4R2D1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5493S4R2D1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm5493S4R2D1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5493S4R2D1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5493S4R2D1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5493S4R2D1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5493S4R2D1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5493S4R2D1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm5493S4R2D1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gm5493S4R2D1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5493S4R2D1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5493S4R2D1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5493S4R2D1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gm5493S4R2D1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5493S4R2D1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5493S4R2D1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Gm5493S4R2D1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5493S4R2D1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5493S4R2D1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.35■□□□□ 0.69
Gm5493S4R2D1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5493S4R2D1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5493S4R2D1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5493S4R2D1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Gm5493S4R2D1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5493S4R2D1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5493S4R2D1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5493S4R2D1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5493S4R2D1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5493S4R2D1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5493S4R2D1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5493S4R2D1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm5493S4R2D1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Gm5493S4R2D1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm5493S4R2D1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Gm5493S4R2D1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5493S4R2D1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5493S4R2D1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5493S4R2D1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5493S4R2D1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5493S4R2D1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5493S4R2D1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5493S4R2D1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5493S4R2D1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gm5493S4R2D1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5493S4R2D1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5493S4R2D1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gm5493S4R2D1 Gm26115-201ENSMUST00000175605 87 ntBASIC19.3■□□□□ 0.68
Gm5493S4R2D1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5493S4R2D1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Gm5493S4R2D1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5493S4R2D1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gm5493S4R2D1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5493S4R2D1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5493S4R2D1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5493S4R2D1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5493S4R2D1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5493S4R2D1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5493S4R2D1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.28■□□□□ 0.68
Gm5493S4R2D1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Gm5493S4R2D1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5493S4R2D1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5493S4R2D1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5493S4R2D1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm5493S4R2D1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5493S4R2D1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5493S4R2D1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gm5493S4R2D1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5493S4R2D1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5493S4R2D1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5493S4R2D1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.25■□□□□ 0.67
Gm5493S4R2D1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5493S4R2D1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5493S4R2D1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm5493S4R2D1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5493S4R2D1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5493S4R2D1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Gm5493S4R2D1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5493S4R2D1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5493S4R2D1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5493S4R2D1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5493S4R2D1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.23■□□□□ 0.67
Gm5493S4R2D1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms