Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb1S4R1E0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb1S4R1E0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb1S4R1E0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb1S4R1E0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
H2afb1S4R1E0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb1S4R1E0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
H2afb1S4R1E0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb1S4R1E0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.64■□□□□ 0.89
H2afb1S4R1E0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb1S4R1E0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb1S4R1E0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.63■□□□□ 0.89
H2afb1S4R1E0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb1S4R1E0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb1S4R1E0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb1S4R1E0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb1S4R1E0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb1S4R1E0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
H2afb1S4R1E0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
H2afb1S4R1E0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb1S4R1E0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb1S4R1E0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.59■□□□□ 0.89
H2afb1S4R1E0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H2afb1S4R1E0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1S4R1E0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1S4R1E0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
H2afb1S4R1E0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1S4R1E0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
H2afb1S4R1E0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
H2afb1S4R1E0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
H2afb1S4R1E0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
H2afb1S4R1E0 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Nkain2-201ENSMUST00000092602 558 ntBASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb1S4R1E0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb1S4R1E0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
H2afb1S4R1E0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
H2afb1S4R1E0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb1S4R1E0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb1S4R1E0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
H2afb1S4R1E0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb1S4R1E0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb1S4R1E0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb1S4R1E0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.5■□□□□ 0.87
H2afb1S4R1E0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
H2afb1S4R1E0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb1S4R1E0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb1S4R1E0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb1S4R1E0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.48■□□□□ 0.87
H2afb1S4R1E0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb1S4R1E0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1S4R1E0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.47■□□□□ 0.87
H2afb1S4R1E0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
H2afb1S4R1E0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1S4R1E0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1S4R1E0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
H2afb1S4R1E0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
H2afb1S4R1E0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms