Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb1S4R1E0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb1S4R1E0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb1S4R1E0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb1S4R1E0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1S4R1E0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
H2afb1S4R1E0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb1S4R1E0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
H2afb1S4R1E0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb1S4R1E0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.64■□□□□ 0.89
H2afb1S4R1E0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb1S4R1E0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb1S4R1E0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.63■□□□□ 0.89
H2afb1S4R1E0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb1S4R1E0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb1S4R1E0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb1S4R1E0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb1S4R1E0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb1S4R1E0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
H2afb1S4R1E0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb1S4R1E0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1S4R1E0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
H2afb1S4R1E0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb1S4R1E0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb1S4R1E0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.59■□□□□ 0.89
H2afb1S4R1E0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H2afb1S4R1E0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1S4R1E0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1S4R1E0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
H2afb1S4R1E0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1S4R1E0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
H2afb1S4R1E0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
H2afb1S4R1E0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
H2afb1S4R1E0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
H2afb1S4R1E0 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Nkain2-201ENSMUST00000092602 558 ntBASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1S4R1E0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb1S4R1E0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb1S4R1E0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.53■□□□□ 0.88
H2afb1S4R1E0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb1S4R1E0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
H2afb1S4R1E0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
H2afb1S4R1E0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb1S4R1E0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb1S4R1E0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
H2afb1S4R1E0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb1S4R1E0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb1S4R1E0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb1S4R1E0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.5■□□□□ 0.87
H2afb1S4R1E0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
H2afb1S4R1E0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb1S4R1E0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb1S4R1E0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb1S4R1E0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.48■□□□□ 0.87
H2afb1S4R1E0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb1S4R1E0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1S4R1E0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.47■□□□□ 0.87
H2afb1S4R1E0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
H2afb1S4R1E0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1S4R1E0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1S4R1E0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
H2afb1S4R1E0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
H2afb1S4R1E0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms