Protein–RNA interactions for Protein: Q9JJZ4

Ube2j1, Ubiquitin-conjugating enzyme E2 J1, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2j1Q9JJZ4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.19■□□□□ 0.66
Ube2j1Q9JJZ4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube2j1Q9JJZ4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube2j1Q9JJZ4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ube2j1Q9JJZ4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ube2j1Q9JJZ4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ube2j1Q9JJZ4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube2j1Q9JJZ4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube2j1Q9JJZ4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube2j1Q9JJZ4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Ube2j1Q9JJZ4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube2j1Q9JJZ4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube2j1Q9JJZ4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube2j1Q9JJZ4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.16■□□□□ 0.66
Ube2j1Q9JJZ4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube2j1Q9JJZ4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube2j1Q9JJZ4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube2j1Q9JJZ4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.15■□□□□ 0.66
Ube2j1Q9JJZ4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ube2j1Q9JJZ4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube2j1Q9JJZ4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube2j1Q9JJZ4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ube2j1Q9JJZ4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube2j1Q9JJZ4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.15■□□□□ 0.66
Ube2j1Q9JJZ4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ube2j1Q9JJZ4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube2j1Q9JJZ4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube2j1Q9JJZ4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.13■□□□□ 0.65
Ube2j1Q9JJZ4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ube2j1Q9JJZ4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ube2j1Q9JJZ4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube2j1Q9JJZ4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube2j1Q9JJZ4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.12■□□□□ 0.65
Ube2j1Q9JJZ4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.12■□□□□ 0.65
Ube2j1Q9JJZ4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.12■□□□□ 0.65
Ube2j1Q9JJZ4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.12■□□□□ 0.65
Ube2j1Q9JJZ4 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.12■□□□□ 0.65
Ube2j1Q9JJZ4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ube2j1Q9JJZ4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube2j1Q9JJZ4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Ube2j1Q9JJZ4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ube2j1Q9JJZ4 Gm8503-201ENSMUST00000118131 455 ntBASIC19.11■□□□□ 0.65
Ube2j1Q9JJZ4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.11■□□□□ 0.65
Ube2j1Q9JJZ4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube2j1Q9JJZ4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ube2j1Q9JJZ4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube2j1Q9JJZ4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.11■□□□□ 0.65
Ube2j1Q9JJZ4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube2j1Q9JJZ4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.1■□□□□ 0.65
Ube2j1Q9JJZ4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.1■□□□□ 0.65
Ube2j1Q9JJZ4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ube2j1Q9JJZ4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube2j1Q9JJZ4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube2j1Q9JJZ4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube2j1Q9JJZ4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.09■□□□□ 0.65
Ube2j1Q9JJZ4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ube2j1Q9JJZ4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ube2j1Q9JJZ4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ube2j1Q9JJZ4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ube2j1Q9JJZ4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube2j1Q9JJZ4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ube2j1Q9JJZ4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube2j1Q9JJZ4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.07■□□□□ 0.64
Ube2j1Q9JJZ4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube2j1Q9JJZ4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube2j1Q9JJZ4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube2j1Q9JJZ4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Ube2j1Q9JJZ4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube2j1Q9JJZ4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube2j1Q9JJZ4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube2j1Q9JJZ4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ube2j1Q9JJZ4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube2j1Q9JJZ4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ube2j1Q9JJZ4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ube2j1Q9JJZ4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ube2j1Q9JJZ4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube2j1Q9JJZ4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube2j1Q9JJZ4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube2j1Q9JJZ4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube2j1Q9JJZ4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube2j1Q9JJZ4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube2j1Q9JJZ4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube2j1Q9JJZ4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.03■□□□□ 0.64
Ube2j1Q9JJZ4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube2j1Q9JJZ4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube2j1Q9JJZ4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube2j1Q9JJZ4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube2j1Q9JJZ4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube2j1Q9JJZ4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ube2j1Q9JJZ4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.02■□□□□ 0.64
Ube2j1Q9JJZ4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ube2j1Q9JJZ4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube2j1Q9JJZ4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube2j1Q9JJZ4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ube2j1Q9JJZ4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ube2j1Q9JJZ4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ube2j1Q9JJZ4 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.01■□□□□ 0.63
Ube2j1Q9JJZ4 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.01■□□□□ 0.63
Ube2j1Q9JJZ4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ube2j1Q9JJZ4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms