Protein–RNA interactions for Protein: Q9CQB8

D730048I06Rik, RIKEN cDNA D730048I06, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
D730048I06RikQ9CQB8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
D730048I06RikQ9CQB8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
D730048I06RikQ9CQB8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
D730048I06RikQ9CQB8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
D730048I06RikQ9CQB8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
D730048I06RikQ9CQB8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.89■■□□□ 1.09
D730048I06RikQ9CQB8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
D730048I06RikQ9CQB8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
D730048I06RikQ9CQB8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
D730048I06RikQ9CQB8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
D730048I06RikQ9CQB8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
D730048I06RikQ9CQB8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
D730048I06RikQ9CQB8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
D730048I06RikQ9CQB8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
D730048I06RikQ9CQB8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
D730048I06RikQ9CQB8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
D730048I06RikQ9CQB8 Gm10420-201ENSMUST00000121713 882 ntBASIC21.86■■□□□ 1.09
D730048I06RikQ9CQB8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
D730048I06RikQ9CQB8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
D730048I06RikQ9CQB8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
D730048I06RikQ9CQB8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.86■■□□□ 1.09
D730048I06RikQ9CQB8 Terc-201ENSMUST00000082862 423 ntBASIC21.85■■□□□ 1.09
D730048I06RikQ9CQB8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
D730048I06RikQ9CQB8 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.85■■□□□ 1.09
D730048I06RikQ9CQB8 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.84■■□□□ 1.09
D730048I06RikQ9CQB8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
D730048I06RikQ9CQB8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
D730048I06RikQ9CQB8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
D730048I06RikQ9CQB8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
D730048I06RikQ9CQB8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.83■■□□□ 1.09
D730048I06RikQ9CQB8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
D730048I06RikQ9CQB8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
D730048I06RikQ9CQB8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
D730048I06RikQ9CQB8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
D730048I06RikQ9CQB8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
D730048I06RikQ9CQB8 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.83■■□□□ 1.08
D730048I06RikQ9CQB8 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.83■■□□□ 1.08
D730048I06RikQ9CQB8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
D730048I06RikQ9CQB8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
D730048I06RikQ9CQB8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
D730048I06RikQ9CQB8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
D730048I06RikQ9CQB8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.82■■□□□ 1.08
D730048I06RikQ9CQB8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
D730048I06RikQ9CQB8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.81■■□□□ 1.08
D730048I06RikQ9CQB8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
D730048I06RikQ9CQB8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
D730048I06RikQ9CQB8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
D730048I06RikQ9CQB8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
D730048I06RikQ9CQB8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
D730048I06RikQ9CQB8 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.77■■□□□ 1.08
D730048I06RikQ9CQB8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
D730048I06RikQ9CQB8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.75■■□□□ 1.07
D730048I06RikQ9CQB8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
D730048I06RikQ9CQB8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.75■■□□□ 1.07
D730048I06RikQ9CQB8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
D730048I06RikQ9CQB8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
D730048I06RikQ9CQB8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
D730048I06RikQ9CQB8 Gm5812-201ENSMUST00000061073 957 ntBASIC21.74■■□□□ 1.07
D730048I06RikQ9CQB8 Gm5921-201ENSMUST00000075898 882 ntBASIC21.74■■□□□ 1.07
D730048I06RikQ9CQB8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
D730048I06RikQ9CQB8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
D730048I06RikQ9CQB8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
D730048I06RikQ9CQB8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
D730048I06RikQ9CQB8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.73■■□□□ 1.07
D730048I06RikQ9CQB8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
D730048I06RikQ9CQB8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
D730048I06RikQ9CQB8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
D730048I06RikQ9CQB8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
D730048I06RikQ9CQB8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
D730048I06RikQ9CQB8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
D730048I06RikQ9CQB8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
D730048I06RikQ9CQB8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
D730048I06RikQ9CQB8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
D730048I06RikQ9CQB8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
D730048I06RikQ9CQB8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.7■■□□□ 1.06
D730048I06RikQ9CQB8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
D730048I06RikQ9CQB8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
D730048I06RikQ9CQB8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
D730048I06RikQ9CQB8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
D730048I06RikQ9CQB8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
D730048I06RikQ9CQB8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
D730048I06RikQ9CQB8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
D730048I06RikQ9CQB8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
D730048I06RikQ9CQB8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
D730048I06RikQ9CQB8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.67■■□□□ 1.06
D730048I06RikQ9CQB8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
D730048I06RikQ9CQB8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
D730048I06RikQ9CQB8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
D730048I06RikQ9CQB8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
D730048I06RikQ9CQB8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
D730048I06RikQ9CQB8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
D730048I06RikQ9CQB8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
D730048I06RikQ9CQB8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
D730048I06RikQ9CQB8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
D730048I06RikQ9CQB8 Amer2-203ENSMUST00000225247 2662 ntBASIC21.65■■□□□ 1.06
D730048I06RikQ9CQB8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.64■■□□□ 1.06
D730048I06RikQ9CQB8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
D730048I06RikQ9CQB8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.64■■□□□ 1.05
D730048I06RikQ9CQB8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.64■■□□□ 1.05
D730048I06RikQ9CQB8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms