Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim33Q99PP7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim33Q99PP7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim33Q99PP7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.55■■□□□ 1.2
Trim33Q99PP7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim33Q99PP7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Trim33Q99PP7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trim33Q99PP7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim33Q99PP7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim33Q99PP7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim33Q99PP7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim33Q99PP7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim33Q99PP7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trim33Q99PP7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
Trim33Q99PP7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim33Q99PP7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
Trim33Q99PP7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Trim33Q99PP7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim33Q99PP7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Trim33Q99PP7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Trim33Q99PP7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Trim33Q99PP7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Trim33Q99PP7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Trim33Q99PP7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
Trim33Q99PP7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim33Q99PP7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim33Q99PP7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim33Q99PP7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim33Q99PP7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.49■■□□□ 1.19
Trim33Q99PP7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Trim33Q99PP7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim33Q99PP7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim33Q99PP7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim33Q99PP7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
Trim33Q99PP7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim33Q99PP7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.46■■□□□ 1.19
Trim33Q99PP7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim33Q99PP7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Trim33Q99PP7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim33Q99PP7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trim33Q99PP7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim33Q99PP7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Trim33Q99PP7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Trim33Q99PP7 Gm4799-201ENSMUST00000095396 657 ntBASIC22.45■■□□□ 1.18
Trim33Q99PP7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.45■■□□□ 1.18
Trim33Q99PP7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim33Q99PP7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Trim33Q99PP7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim33Q99PP7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim33Q99PP7 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.44■■□□□ 1.18
Trim33Q99PP7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim33Q99PP7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim33Q99PP7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
Trim33Q99PP7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim33Q99PP7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.43■■□□□ 1.18
Trim33Q99PP7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.43■■□□□ 1.18
Trim33Q99PP7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim33Q99PP7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim33Q99PP7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Trim33Q99PP7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim33Q99PP7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim33Q99PP7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Trim33Q99PP7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim33Q99PP7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim33Q99PP7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Trim33Q99PP7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim33Q99PP7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim33Q99PP7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Trim33Q99PP7 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.39■■□□□ 1.18
Trim33Q99PP7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim33Q99PP7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim33Q99PP7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim33Q99PP7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim33Q99PP7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim33Q99PP7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Trim33Q99PP7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim33Q99PP7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.38■■□□□ 1.17
Trim33Q99PP7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim33Q99PP7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trim33Q99PP7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim33Q99PP7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trim33Q99PP7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim33Q99PP7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim33Q99PP7 Mir3960-201ENSMUST00000198213 73 ntBASIC22.37■■□□□ 1.17
Trim33Q99PP7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.37■■□□□ 1.17
Trim33Q99PP7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.37■■□□□ 1.17
Trim33Q99PP7 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.37■■□□□ 1.17
Trim33Q99PP7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
Trim33Q99PP7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim33Q99PP7 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.36■■□□□ 1.17
Trim33Q99PP7 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.36■■□□□ 1.17
Trim33Q99PP7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
Trim33Q99PP7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim33Q99PP7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim33Q99PP7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim33Q99PP7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim33Q99PP7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim33Q99PP7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim33Q99PP7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim33Q99PP7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms