Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scrt1Q99M85 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scrt1Q99M85 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scrt1Q99M85 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scrt1Q99M85 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scrt1Q99M85 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scrt1Q99M85 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scrt1Q99M85 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scrt1Q99M85 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Scrt1Q99M85 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scrt1Q99M85 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.11■□□□□ 0.81
Scrt1Q99M85 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scrt1Q99M85 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scrt1Q99M85 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scrt1Q99M85 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scrt1Q99M85 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scrt1Q99M85 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scrt1Q99M85 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scrt1Q99M85 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scrt1Q99M85 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scrt1Q99M85 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scrt1Q99M85 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scrt1Q99M85 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.09■□□□□ 0.81
Scrt1Q99M85 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
Scrt1Q99M85 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.09■□□□□ 0.81
Scrt1Q99M85 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scrt1Q99M85 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scrt1Q99M85 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Scrt1Q99M85 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.08■□□□□ 0.81
Scrt1Q99M85 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Scrt1Q99M85 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scrt1Q99M85 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.07■□□□□ 0.8
Scrt1Q99M85 Gm37136-201ENSMUST00000194368 194 ntBASIC20.07■□□□□ 0.8
Scrt1Q99M85 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.07■□□□□ 0.8
Scrt1Q99M85 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scrt1Q99M85 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Scrt1Q99M85 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scrt1Q99M85 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scrt1Q99M85 Gm5812-201ENSMUST00000061073 957 ntBASIC20.06■□□□□ 0.8
Scrt1Q99M85 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scrt1Q99M85 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.05■□□□□ 0.8
Scrt1Q99M85 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scrt1Q99M85 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.05■□□□□ 0.8
Scrt1Q99M85 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.05■□□□□ 0.8
Scrt1Q99M85 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scrt1Q99M85 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scrt1Q99M85 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.04■□□□□ 0.8
Scrt1Q99M85 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scrt1Q99M85 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scrt1Q99M85 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scrt1Q99M85 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scrt1Q99M85 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Scrt1Q99M85 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scrt1Q99M85 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.04■□□□□ 0.8
Scrt1Q99M85 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scrt1Q99M85 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.03■□□□□ 0.8
Scrt1Q99M85 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scrt1Q99M85 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scrt1Q99M85 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scrt1Q99M85 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scrt1Q99M85 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Scrt1Q99M85 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scrt1Q99M85 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scrt1Q99M85 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scrt1Q99M85 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scrt1Q99M85 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Scrt1Q99M85 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scrt1Q99M85 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20■□□□□ 0.79
Scrt1Q99M85 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scrt1Q99M85 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scrt1Q99M85 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scrt1Q99M85 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scrt1Q99M85 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scrt1Q99M85 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.99■□□□□ 0.79
Scrt1Q99M85 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Scrt1Q99M85 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Scrt1Q99M85 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scrt1Q99M85 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Scrt1Q99M85 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.98■□□□□ 0.79
Scrt1Q99M85 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scrt1Q99M85 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scrt1Q99M85 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scrt1Q99M85 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scrt1Q99M85 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scrt1Q99M85 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.97■□□□□ 0.79
Scrt1Q99M85 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.97■□□□□ 0.79
Scrt1Q99M85 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scrt1Q99M85 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Scrt1Q99M85 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scrt1Q99M85 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scrt1Q99M85 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scrt1Q99M85 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.96■□□□□ 0.79
Scrt1Q99M85 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scrt1Q99M85 Gm10420-201ENSMUST00000121713 882 ntBASIC19.95■□□□□ 0.78
Scrt1Q99M85 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scrt1Q99M85 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scrt1Q99M85 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.94■□□□□ 0.78
Scrt1Q99M85 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scrt1Q99M85 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scrt1Q99M85 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 7.5 ms