Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha3Q91Y16 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Pcdha3Q91Y16 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdha3Q91Y16 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdha3Q91Y16 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdha3Q91Y16 Gm37136-201ENSMUST00000194368 194 ntBASIC24■■□□□ 1.43
Pcdha3Q91Y16 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Pcdha3Q91Y16 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdha3Q91Y16 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha3Q91Y16 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha3Q91Y16 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha3Q91Y16 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha3Q91Y16 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Pcdha3Q91Y16 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha3Q91Y16 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha3Q91Y16 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha3Q91Y16 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.97■■□□□ 1.43
Pcdha3Q91Y16 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha3Q91Y16 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha3Q91Y16 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Pcdha3Q91Y16 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdha3Q91Y16 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdha3Q91Y16 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Pcdha3Q91Y16 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdha3Q91Y16 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha3Q91Y16 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha3Q91Y16 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha3Q91Y16 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha3Q91Y16 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha3Q91Y16 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha3Q91Y16 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.93■■□□□ 1.42
Pcdha3Q91Y16 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.93■■□□□ 1.42
Pcdha3Q91Y16 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha3Q91Y16 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.92■■□□□ 1.42
Pcdha3Q91Y16 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Pcdha3Q91Y16 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha3Q91Y16 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha3Q91Y16 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha3Q91Y16 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha3Q91Y16 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha3Q91Y16 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.9■■□□□ 1.42
Pcdha3Q91Y16 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha3Q91Y16 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha3Q91Y16 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha3Q91Y16 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha3Q91Y16 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Pcdha3Q91Y16 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha3Q91Y16 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdha3Q91Y16 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdha3Q91Y16 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Pcdha3Q91Y16 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha3Q91Y16 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Pcdha3Q91Y16 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha3Q91Y16 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.88■■□□□ 1.41
Pcdha3Q91Y16 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha3Q91Y16 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
Pcdha3Q91Y16 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha3Q91Y16 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha3Q91Y16 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha3Q91Y16 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha3Q91Y16 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha3Q91Y16 Gm4799-201ENSMUST00000095396 657 ntBASIC23.85■■□□□ 1.41
Pcdha3Q91Y16 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.84■■□□□ 1.41
Pcdha3Q91Y16 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Pcdha3Q91Y16 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Pcdha3Q91Y16 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha3Q91Y16 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha3Q91Y16 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha3Q91Y16 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha3Q91Y16 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdha3Q91Y16 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdha3Q91Y16 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdha3Q91Y16 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha3Q91Y16 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha3Q91Y16 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha3Q91Y16 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha3Q91Y16 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.8■■□□□ 1.4
Pcdha3Q91Y16 Gm6311-201ENSMUST00000073790 878 ntBASIC23.8■■□□□ 1.4
Pcdha3Q91Y16 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Pcdha3Q91Y16 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha3Q91Y16 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha3Q91Y16 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha3Q91Y16 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha3Q91Y16 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Pcdha3Q91Y16 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Pcdha3Q91Y16 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha3Q91Y16 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha3Q91Y16 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha3Q91Y16 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha3Q91Y16 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha3Q91Y16 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Pcdha3Q91Y16 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.77■■□□□ 1.4
Pcdha3Q91Y16 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdha3Q91Y16 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.76■■□□□ 1.39
Pcdha3Q91Y16 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.76■■□□□ 1.39
Pcdha3Q91Y16 Mir3960-201ENSMUST00000198213 73 ntBASIC23.76■■□□□ 1.39
Pcdha3Q91Y16 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.76■■□□□ 1.39
Pcdha3Q91Y16 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.76■■□□□ 1.39
Pcdha3Q91Y16 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdha3Q91Y16 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 204 ms