Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab40bQ8VHP8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab40bQ8VHP8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab40bQ8VHP8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab40bQ8VHP8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab40bQ8VHP8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab40bQ8VHP8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab40bQ8VHP8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rab40bQ8VHP8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rab40bQ8VHP8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.65■□□□□ 0.9
Rab40bQ8VHP8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rab40bQ8VHP8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.64■□□□□ 0.9
Rab40bQ8VHP8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rab40bQ8VHP8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rab40bQ8VHP8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.64■□□□□ 0.89
Rab40bQ8VHP8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Rab40bQ8VHP8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab40bQ8VHP8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab40bQ8VHP8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab40bQ8VHP8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab40bQ8VHP8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab40bQ8VHP8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.61■□□□□ 0.89
Rab40bQ8VHP8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.61■□□□□ 0.89
Rab40bQ8VHP8 Zfp131-205ENSMUST00000223812 663 ntBASIC20.61■□□□□ 0.89
Rab40bQ8VHP8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab40bQ8VHP8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab40bQ8VHP8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rab40bQ8VHP8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab40bQ8VHP8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab40bQ8VHP8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rab40bQ8VHP8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab40bQ8VHP8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Rab40bQ8VHP8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Rab40bQ8VHP8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab40bQ8VHP8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab40bQ8VHP8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab40bQ8VHP8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab40bQ8VHP8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab40bQ8VHP8 Gm24970-201ENSMUST00000175582 82 ntBASIC20.59■□□□□ 0.89
Rab40bQ8VHP8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab40bQ8VHP8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rab40bQ8VHP8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rab40bQ8VHP8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.57■□□□□ 0.88
Rab40bQ8VHP8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rab40bQ8VHP8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rab40bQ8VHP8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Rab40bQ8VHP8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.57■□□□□ 0.88
Rab40bQ8VHP8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Rab40bQ8VHP8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab40bQ8VHP8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.56■□□□□ 0.88
Rab40bQ8VHP8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab40bQ8VHP8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab40bQ8VHP8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab40bQ8VHP8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab40bQ8VHP8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rab40bQ8VHP8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rab40bQ8VHP8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.55■□□□□ 0.88
Rab40bQ8VHP8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab40bQ8VHP8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab40bQ8VHP8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Rab40bQ8VHP8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab40bQ8VHP8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab40bQ8VHP8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab40bQ8VHP8 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.53■□□□□ 0.88
Rab40bQ8VHP8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab40bQ8VHP8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab40bQ8VHP8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.52■□□□□ 0.88
Rab40bQ8VHP8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab40bQ8VHP8 Gm9397-201ENSMUST00000200125 605 ntBASIC20.52■□□□□ 0.88
Rab40bQ8VHP8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rab40bQ8VHP8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab40bQ8VHP8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Rab40bQ8VHP8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab40bQ8VHP8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab40bQ8VHP8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab40bQ8VHP8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab40bQ8VHP8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab40bQ8VHP8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rab40bQ8VHP8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
Rab40bQ8VHP8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rab40bQ8VHP8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rab40bQ8VHP8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rab40bQ8VHP8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rab40bQ8VHP8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab40bQ8VHP8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rab40bQ8VHP8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab40bQ8VHP8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab40bQ8VHP8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rab40bQ8VHP8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab40bQ8VHP8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.49■□□□□ 0.87
Rab40bQ8VHP8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab40bQ8VHP8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab40bQ8VHP8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rab40bQ8VHP8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab40bQ8VHP8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab40bQ8VHP8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab40bQ8VHP8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab40bQ8VHP8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab40bQ8VHP8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab40bQ8VHP8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms