Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cdt1Q8R4E9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cdt1Q8R4E9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Cdt1Q8R4E9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cdt1Q8R4E9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.14■■□□□ 1.13
Cdt1Q8R4E9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cdt1Q8R4E9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cdt1Q8R4E9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cdt1Q8R4E9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cdt1Q8R4E9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cdt1Q8R4E9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cdt1Q8R4E9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cdt1Q8R4E9 Scarna2-201ENSMUST00000157560 414 ntBASIC22.1■■□□□ 1.13
Cdt1Q8R4E9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cdt1Q8R4E9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cdt1Q8R4E9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cdt1Q8R4E9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cdt1Q8R4E9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cdt1Q8R4E9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cdt1Q8R4E9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cdt1Q8R4E9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cdt1Q8R4E9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Cdt1Q8R4E9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cdt1Q8R4E9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdt1Q8R4E9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cdt1Q8R4E9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdt1Q8R4E9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.06■■□□□ 1.12
Cdt1Q8R4E9 Gm11687-201ENSMUST00000118911 886 ntBASIC22.06■■□□□ 1.12
Cdt1Q8R4E9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdt1Q8R4E9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdt1Q8R4E9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdt1Q8R4E9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Gm12366-201ENSMUST00000121722 873 ntBASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Gm5786-201ENSMUST00000085368 882 ntBASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdt1Q8R4E9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cdt1Q8R4E9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.04■■□□□ 1.12
Cdt1Q8R4E9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cdt1Q8R4E9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cdt1Q8R4E9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdt1Q8R4E9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Cdt1Q8R4E9 Gm9806-201ENSMUST00000051080 552 ntBASIC22.03■■□□□ 1.12
Cdt1Q8R4E9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cdt1Q8R4E9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Cdt1Q8R4E9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cdt1Q8R4E9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Cdt1Q8R4E9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.01■■□□□ 1.11
Cdt1Q8R4E9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdt1Q8R4E9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdt1Q8R4E9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cdt1Q8R4E9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdt1Q8R4E9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Cdt1Q8R4E9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cdt1Q8R4E9 Gm16437-201ENSMUST00000025669 507 ntBASIC21.99■■□□□ 1.11
Cdt1Q8R4E9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cdt1Q8R4E9 Gm4799-201ENSMUST00000095396 657 ntBASIC21.99■■□□□ 1.11
Cdt1Q8R4E9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdt1Q8R4E9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Cdt1Q8R4E9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Cdt1Q8R4E9 Gm37136-201ENSMUST00000194368 194 ntBASIC21.98■■□□□ 1.11
Cdt1Q8R4E9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdt1Q8R4E9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdt1Q8R4E9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.96■■□□□ 1.11
Cdt1Q8R4E9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Cdt1Q8R4E9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cdt1Q8R4E9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Cdt1Q8R4E9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdt1Q8R4E9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdt1Q8R4E9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdt1Q8R4E9 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.95■■□□□ 1.1
Cdt1Q8R4E9 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.95■■□□□ 1.1
Cdt1Q8R4E9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdt1Q8R4E9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdt1Q8R4E9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdt1Q8R4E9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdt1Q8R4E9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.94■■□□□ 1.1
Cdt1Q8R4E9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdt1Q8R4E9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdt1Q8R4E9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Cdt1Q8R4E9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdt1Q8R4E9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdt1Q8R4E9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.92■■□□□ 1.1
Cdt1Q8R4E9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cdt1Q8R4E9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdt1Q8R4E9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Cdt1Q8R4E9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdt1Q8R4E9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdt1Q8R4E9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdt1Q8R4E9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdt1Q8R4E9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdt1Q8R4E9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms