Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc59Q8R2N0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Ccdc59Q8R2N0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.55■■□□□ 1.04
Ccdc59Q8R2N0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc59Q8R2N0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc59Q8R2N0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc59Q8R2N0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc59Q8R2N0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc59Q8R2N0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ccdc59Q8R2N0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc59Q8R2N0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc59Q8R2N0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc59Q8R2N0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc59Q8R2N0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc59Q8R2N0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc59Q8R2N0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc59Q8R2N0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc59Q8R2N0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc59Q8R2N0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc59Q8R2N0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.52■■□□□ 1.04
Ccdc59Q8R2N0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc59Q8R2N0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc59Q8R2N0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc59Q8R2N0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ccdc59Q8R2N0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc59Q8R2N0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc59Q8R2N0 Gm6821-201ENSMUST00000107540 542 ntBASIC21.51■■□□□ 1.03
Ccdc59Q8R2N0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Ccdc59Q8R2N0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc59Q8R2N0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc59Q8R2N0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc59Q8R2N0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc59Q8R2N0 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.5■■□□□ 1.03
Ccdc59Q8R2N0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc59Q8R2N0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc59Q8R2N0 Gm8503-201ENSMUST00000118131 455 ntBASIC21.49■■□□□ 1.03
Ccdc59Q8R2N0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc59Q8R2N0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc59Q8R2N0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc59Q8R2N0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc59Q8R2N0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc59Q8R2N0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc59Q8R2N0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc59Q8R2N0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ccdc59Q8R2N0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc59Q8R2N0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc59Q8R2N0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.47■■□□□ 1.03
Ccdc59Q8R2N0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc59Q8R2N0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc59Q8R2N0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ccdc59Q8R2N0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ccdc59Q8R2N0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ccdc59Q8R2N0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc59Q8R2N0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc59Q8R2N0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc59Q8R2N0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ccdc59Q8R2N0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc59Q8R2N0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ccdc59Q8R2N0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc59Q8R2N0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc59Q8R2N0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ccdc59Q8R2N0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc59Q8R2N0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc59Q8R2N0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc59Q8R2N0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Ccdc59Q8R2N0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc59Q8R2N0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc59Q8R2N0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc59Q8R2N0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc59Q8R2N0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc59Q8R2N0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc59Q8R2N0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc59Q8R2N0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.39■■□□□ 1.02
Ccdc59Q8R2N0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc59Q8R2N0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc59Q8R2N0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.39■■□□□ 1.01
Ccdc59Q8R2N0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc59Q8R2N0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ccdc59Q8R2N0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc59Q8R2N0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc59Q8R2N0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ccdc59Q8R2N0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc59Q8R2N0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc59Q8R2N0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc59Q8R2N0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc59Q8R2N0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc59Q8R2N0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc59Q8R2N0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ccdc59Q8R2N0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Ccdc59Q8R2N0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Ccdc59Q8R2N0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc59Q8R2N0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc59Q8R2N0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc59Q8R2N0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.37■■□□□ 1.01
Ccdc59Q8R2N0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.37■■□□□ 1.01
Ccdc59Q8R2N0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc59Q8R2N0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.36■■□□□ 1.01
Ccdc59Q8R2N0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Ccdc59Q8R2N0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.36■■□□□ 1.01
Ccdc59Q8R2N0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms