Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim31Q8R0K2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim31Q8R0K2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.25■■□□□ 1.15
Trim31Q8R0K2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Trim31Q8R0K2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Trim31Q8R0K2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Trim31Q8R0K2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.24■■□□□ 1.15
Trim31Q8R0K2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trim31Q8R0K2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim31Q8R0K2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim31Q8R0K2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Trim31Q8R0K2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim31Q8R0K2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim31Q8R0K2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Trim31Q8R0K2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim31Q8R0K2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Trim31Q8R0K2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.2■■□□□ 1.14
Trim31Q8R0K2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim31Q8R0K2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Trim31Q8R0K2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.19■■□□□ 1.14
Trim31Q8R0K2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim31Q8R0K2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Trim31Q8R0K2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim31Q8R0K2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Trim31Q8R0K2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim31Q8R0K2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim31Q8R0K2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Trim31Q8R0K2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim31Q8R0K2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim31Q8R0K2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.16■■□□□ 1.14
Trim31Q8R0K2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim31Q8R0K2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim31Q8R0K2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim31Q8R0K2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim31Q8R0K2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim31Q8R0K2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim31Q8R0K2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim31Q8R0K2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Trim31Q8R0K2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trim31Q8R0K2 Gm37136-201ENSMUST00000194368 194 ntBASIC22.14■■□□□ 1.13
Trim31Q8R0K2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim31Q8R0K2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim31Q8R0K2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim31Q8R0K2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Trim31Q8R0K2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim31Q8R0K2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim31Q8R0K2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim31Q8R0K2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim31Q8R0K2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim31Q8R0K2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim31Q8R0K2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim31Q8R0K2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim31Q8R0K2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim31Q8R0K2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.1■■□□□ 1.13
Trim31Q8R0K2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.1■■□□□ 1.13
Trim31Q8R0K2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trim31Q8R0K2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Trim31Q8R0K2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim31Q8R0K2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim31Q8R0K2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim31Q8R0K2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Trim31Q8R0K2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trim31Q8R0K2 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.08■■□□□ 1.12
Trim31Q8R0K2 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.08■■□□□ 1.12
Trim31Q8R0K2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Trim31Q8R0K2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim31Q8R0K2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim31Q8R0K2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim31Q8R0K2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.07■■□□□ 1.12
Trim31Q8R0K2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim31Q8R0K2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trim31Q8R0K2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim31Q8R0K2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim31Q8R0K2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim31Q8R0K2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim31Q8R0K2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.05■■□□□ 1.12
Trim31Q8R0K2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim31Q8R0K2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim31Q8R0K2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim31Q8R0K2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Trim31Q8R0K2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.04■■□□□ 1.12
Trim31Q8R0K2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.04■■□□□ 1.12
Trim31Q8R0K2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim31Q8R0K2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim31Q8R0K2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Trim31Q8R0K2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Trim31Q8R0K2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim31Q8R0K2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim31Q8R0K2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim31Q8R0K2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Trim31Q8R0K2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.01■■□□□ 1.11
Trim31Q8R0K2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.01■■□□□ 1.11
Trim31Q8R0K2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim31Q8R0K2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim31Q8R0K2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim31Q8R0K2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim31Q8R0K2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim31Q8R0K2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim31Q8R0K2 Gm4799-201ENSMUST00000095396 657 ntBASIC22■■□□□ 1.11
Trim31Q8R0K2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms