Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Ddx54Q8K4L0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ddx54Q8K4L0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ddx54Q8K4L0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ddx54Q8K4L0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ddx54Q8K4L0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Ddx54Q8K4L0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ddx54Q8K4L0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ddx54Q8K4L0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Ddx54Q8K4L0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ddx54Q8K4L0 Gm14117-201ENSMUST00000122417 843 ntBASIC31.13■■■□□ 2.57
Ddx54Q8K4L0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ddx54Q8K4L0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Ddx54Q8K4L0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.12■■■□□ 2.57
Ddx54Q8K4L0 Gm45102-201ENSMUST00000207427 857 ntBASIC31.12■■■□□ 2.57
Ddx54Q8K4L0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ddx54Q8K4L0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Ddx54Q8K4L0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC31.11■■■□□ 2.57
Ddx54Q8K4L0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ddx54Q8K4L0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.09■■■□□ 2.57
Ddx54Q8K4L0 Gm13238-201ENSMUST00000117655 780 ntBASIC31.08■■■□□ 2.57
Ddx54Q8K4L0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC31.08■■■□□ 2.57
Ddx54Q8K4L0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC31.08■■■□□ 2.57
Ddx54Q8K4L0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC31.08■■■□□ 2.57
Ddx54Q8K4L0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ddx54Q8K4L0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ddx54Q8K4L0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC31.06■■■□□ 2.56
Ddx54Q8K4L0 Terc-201ENSMUST00000082862 423 ntBASIC31.06■■■□□ 2.56
Ddx54Q8K4L0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ddx54Q8K4L0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ddx54Q8K4L0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
Ddx54Q8K4L0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ddx54Q8K4L0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
Ddx54Q8K4L0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Ddx54Q8K4L0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Ddx54Q8K4L0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC31.03■■■□□ 2.56
Ddx54Q8K4L0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC31.03■■■□□ 2.56
Ddx54Q8K4L0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Ddx54Q8K4L0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ddx54Q8K4L0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ddx54Q8K4L0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ddx54Q8K4L0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC31■■■□□ 2.55
Ddx54Q8K4L0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC30.99■■■□□ 2.55
Ddx54Q8K4L0 AC153911.1-201ENSMUST00000220378 758 ntBASIC30.99■■■□□ 2.55
Ddx54Q8K4L0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ddx54Q8K4L0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ddx54Q8K4L0 Nsd1-203ENSMUST00000224156 1149 ntBASIC30.98■■■□□ 2.55
Ddx54Q8K4L0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ddx54Q8K4L0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ddx54Q8K4L0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC30.97■■■□□ 2.55
Ddx54Q8K4L0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Ddx54Q8K4L0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC30.97■■■□□ 2.55
Ddx54Q8K4L0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Ddx54Q8K4L0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Ddx54Q8K4L0 Gm43566-201ENSMUST00000196851 808 ntBASIC30.96■■■□□ 2.55
Ddx54Q8K4L0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ddx54Q8K4L0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC30.95■■■□□ 2.55
Ddx54Q8K4L0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ddx54Q8K4L0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
Ddx54Q8K4L0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ddx54Q8K4L0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ddx54Q8K4L0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ddx54Q8K4L0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
Ddx54Q8K4L0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC30.9■■■□□ 2.54
Ddx54Q8K4L0 Gm9959-201ENSMUST00000068277 390 ntBASIC30.9■■■□□ 2.54
Ddx54Q8K4L0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC30.9■■■□□ 2.54
Ddx54Q8K4L0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Ddx54Q8K4L0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Ddx54Q8K4L0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Ddx54Q8K4L0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC30.89■■■□□ 2.54
Ddx54Q8K4L0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
Ddx54Q8K4L0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Ddx54Q8K4L0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC30.88■■■□□ 2.53
Ddx54Q8K4L0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ddx54Q8K4L0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Ddx54Q8K4L0 Gm42501-201ENSMUST00000200220 1026 ntBASIC30.87■■■□□ 2.53
Ddx54Q8K4L0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ddx54Q8K4L0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Ddx54Q8K4L0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Ddx54Q8K4L0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ddx54Q8K4L0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ddx54Q8K4L0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ddx54Q8K4L0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ddx54Q8K4L0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC30.84■■■□□ 2.53
Ddx54Q8K4L0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC30.83■■■□□ 2.53
Ddx54Q8K4L0 Gm45444-201ENSMUST00000211394 898 ntBASIC30.83■■■□□ 2.53
Ddx54Q8K4L0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC30.83■■■□□ 2.53
Ddx54Q8K4L0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Ddx54Q8K4L0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
Ddx54Q8K4L0 Gm44428-201ENSMUST00000204474 874 ntBASIC30.82■■■□□ 2.52
Ddx54Q8K4L0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ddx54Q8K4L0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ddx54Q8K4L0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
Ddx54Q8K4L0 Gm43592-201ENSMUST00000196922 1165 ntBASIC30.8■■■□□ 2.52
Ddx54Q8K4L0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
Ddx54Q8K4L0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Ddx54Q8K4L0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC30.8■■■□□ 2.52
Ddx54Q8K4L0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
Ddx54Q8K4L0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC30.79■■■□□ 2.52
Ddx54Q8K4L0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms