Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trnt1Q8K1J6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trnt1Q8K1J6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trnt1Q8K1J6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trnt1Q8K1J6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trnt1Q8K1J6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trnt1Q8K1J6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trnt1Q8K1J6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trnt1Q8K1J6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trnt1Q8K1J6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trnt1Q8K1J6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trnt1Q8K1J6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Trnt1Q8K1J6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trnt1Q8K1J6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trnt1Q8K1J6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trnt1Q8K1J6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trnt1Q8K1J6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trnt1Q8K1J6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Trnt1Q8K1J6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.21■■□□□ 1.15
Trnt1Q8K1J6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trnt1Q8K1J6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trnt1Q8K1J6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trnt1Q8K1J6 Gm7432-201ENSMUST00000210343 879 ntBASIC22.2■■□□□ 1.14
Trnt1Q8K1J6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trnt1Q8K1J6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.19■■□□□ 1.14
Trnt1Q8K1J6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trnt1Q8K1J6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trnt1Q8K1J6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trnt1Q8K1J6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trnt1Q8K1J6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trnt1Q8K1J6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trnt1Q8K1J6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Trnt1Q8K1J6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trnt1Q8K1J6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trnt1Q8K1J6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trnt1Q8K1J6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trnt1Q8K1J6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trnt1Q8K1J6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Trnt1Q8K1J6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trnt1Q8K1J6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.15■■□□□ 1.14
Trnt1Q8K1J6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.15■■□□□ 1.14
Trnt1Q8K1J6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.15■■□□□ 1.14
Trnt1Q8K1J6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trnt1Q8K1J6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trnt1Q8K1J6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Trnt1Q8K1J6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trnt1Q8K1J6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trnt1Q8K1J6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trnt1Q8K1J6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.13■■□□□ 1.13
Trnt1Q8K1J6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trnt1Q8K1J6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trnt1Q8K1J6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trnt1Q8K1J6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Trnt1Q8K1J6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trnt1Q8K1J6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Trnt1Q8K1J6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trnt1Q8K1J6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Trnt1Q8K1J6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trnt1Q8K1J6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trnt1Q8K1J6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trnt1Q8K1J6 Gm11599-201ENSMUST00000118720 878 ntBASIC22.09■■□□□ 1.13
Trnt1Q8K1J6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trnt1Q8K1J6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Trnt1Q8K1J6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Trnt1Q8K1J6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trnt1Q8K1J6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Trnt1Q8K1J6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Trnt1Q8K1J6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Trnt1Q8K1J6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trnt1Q8K1J6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trnt1Q8K1J6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.07■■□□□ 1.12
Trnt1Q8K1J6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.07■■□□□ 1.12
Trnt1Q8K1J6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trnt1Q8K1J6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trnt1Q8K1J6 Gm4799-201ENSMUST00000095396 657 ntBASIC22.06■■□□□ 1.12
Trnt1Q8K1J6 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.06■■□□□ 1.12
Trnt1Q8K1J6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trnt1Q8K1J6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trnt1Q8K1J6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trnt1Q8K1J6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trnt1Q8K1J6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trnt1Q8K1J6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.04■■□□□ 1.12
Trnt1Q8K1J6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trnt1Q8K1J6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trnt1Q8K1J6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trnt1Q8K1J6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trnt1Q8K1J6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trnt1Q8K1J6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trnt1Q8K1J6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trnt1Q8K1J6 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.03■■□□□ 1.12
Trnt1Q8K1J6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trnt1Q8K1J6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trnt1Q8K1J6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trnt1Q8K1J6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trnt1Q8K1J6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.02■■□□□ 1.12
Trnt1Q8K1J6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trnt1Q8K1J6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trnt1Q8K1J6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.01■■□□□ 1.11
Trnt1Q8K1J6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.01■■□□□ 1.11
Trnt1Q8K1J6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms