Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Q8CD60 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Q8CD60 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Q8CD60 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Q8CD60 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.17■■□□□ 1.46
Q8CD60 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Q8CD60 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.17■■□□□ 1.46
Q8CD60 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Q8CD60 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Q8CD60 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Q8CD60 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Q8CD60 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Q8CD60 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.16■■□□□ 1.46
Q8CD60 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Q8CD60 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Q8CD60 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.15■■□□□ 1.46
Q8CD60 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Q8CD60 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Q8CD60 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Q8CD60 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Q8CD60 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.14■■□□□ 1.46
Q8CD60 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Q8CD60 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Q8CD60 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Q8CD60 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Q8CD60 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Q8CD60 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Q8CD60 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Q8CD60 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.13■■□□□ 1.45
Q8CD60 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Q8CD60 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Q8CD60 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.13■■□□□ 1.45
Q8CD60 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.13■■□□□ 1.45
Q8CD60 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Q8CD60 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Q8CD60 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Q8CD60 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Q8CD60 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Q8CD60 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Q8CD60 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Q8CD60 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.12■■□□□ 1.45
Q8CD60 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Q8CD60 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.11■■□□□ 1.45
Q8CD60 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Q8CD60 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Q8CD60 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Q8CD60 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Q8CD60 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Q8CD60 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Q8CD60 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Q8CD60 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Q8CD60 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Q8CD60 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.08■■□□□ 1.45
Q8CD60 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.08■■□□□ 1.45
Q8CD60 Mir3960-201ENSMUST00000198213 73 ntBASIC24.08■■□□□ 1.45
Q8CD60 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.08■■□□□ 1.45
Q8CD60 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Q8CD60 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Q8CD60 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Q8CD60 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Q8CD60 Gm45364-201ENSMUST00000210883 159 ntBASIC24.07■■□□□ 1.44
Q8CD60 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Q8CD60 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Q8CD60 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Q8CD60 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Q8CD60 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Q8CD60 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Q8CD60 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.05■■□□□ 1.44
Q8CD60 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.05■■□□□ 1.44
Q8CD60 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Q8CD60 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Q8CD60 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Q8CD60 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.04■■□□□ 1.44
Q8CD60 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Q8CD60 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Q8CD60 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Q8CD60 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Q8CD60 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.02■■□□□ 1.44
Q8CD60 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.01■■□□□ 1.43
Q8CD60 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.01■■□□□ 1.43
Q8CD60 Gm6311-201ENSMUST00000073790 878 ntBASIC24■■□□□ 1.43
Q8CD60 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Q8CD60 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Q8CD60 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Q8CD60 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.98■■□□□ 1.43
Q8CD60 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Q8CD60 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.98■■□□□ 1.43
Q8CD60 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.97■■□□□ 1.43
Q8CD60 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.97■■□□□ 1.43
Q8CD60 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Q8CD60 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Q8CD60 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Q8CD60 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.97■■□□□ 1.43
Q8CD60 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Q8CD60 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Q8CD60 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
Q8CD60 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.95■■□□□ 1.42
Q8CD60 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
Q8CD60 Gm9812-201ENSMUST00000061934 968 ntBASIC23.95■■□□□ 1.42
Q8CD60 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms