Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rfx6Q8C7R7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rfx6Q8C7R7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rfx6Q8C7R7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rfx6Q8C7R7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rfx6Q8C7R7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Rfx6Q8C7R7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rfx6Q8C7R7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rfx6Q8C7R7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rfx6Q8C7R7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rfx6Q8C7R7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
Rfx6Q8C7R7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rfx6Q8C7R7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rfx6Q8C7R7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rfx6Q8C7R7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rfx6Q8C7R7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rfx6Q8C7R7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rfx6Q8C7R7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rfx6Q8C7R7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Rfx6Q8C7R7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Rfx6Q8C7R7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rfx6Q8C7R7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.18■■□□□ 1.3
Rfx6Q8C7R7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Rfx6Q8C7R7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Rfx6Q8C7R7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rfx6Q8C7R7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.18■■□□□ 1.3
Rfx6Q8C7R7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rfx6Q8C7R7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Rfx6Q8C7R7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Rfx6Q8C7R7 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.17■■□□□ 1.3
Rfx6Q8C7R7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
Rfx6Q8C7R7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rfx6Q8C7R7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rfx6Q8C7R7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rfx6Q8C7R7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rfx6Q8C7R7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rfx6Q8C7R7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rfx6Q8C7R7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rfx6Q8C7R7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rfx6Q8C7R7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rfx6Q8C7R7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rfx6Q8C7R7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rfx6Q8C7R7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rfx6Q8C7R7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rfx6Q8C7R7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rfx6Q8C7R7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rfx6Q8C7R7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rfx6Q8C7R7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Rfx6Q8C7R7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rfx6Q8C7R7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Rfx6Q8C7R7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rfx6Q8C7R7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rfx6Q8C7R7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rfx6Q8C7R7 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.13■■□□□ 1.29
Rfx6Q8C7R7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rfx6Q8C7R7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Rfx6Q8C7R7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rfx6Q8C7R7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.12■■□□□ 1.29
Rfx6Q8C7R7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Rfx6Q8C7R7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rfx6Q8C7R7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rfx6Q8C7R7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rfx6Q8C7R7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.1■■□□□ 1.29
Rfx6Q8C7R7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rfx6Q8C7R7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rfx6Q8C7R7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.09■■□□□ 1.29
Rfx6Q8C7R7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rfx6Q8C7R7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rfx6Q8C7R7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
Rfx6Q8C7R7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rfx6Q8C7R7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.09■■□□□ 1.29
Rfx6Q8C7R7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rfx6Q8C7R7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Rfx6Q8C7R7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.08■■□□□ 1.29
Rfx6Q8C7R7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.08■■□□□ 1.29
Rfx6Q8C7R7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rfx6Q8C7R7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rfx6Q8C7R7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rfx6Q8C7R7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rfx6Q8C7R7 Nkain2-201ENSMUST00000092602 558 ntBASIC23.07■■□□□ 1.28
Rfx6Q8C7R7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rfx6Q8C7R7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfx6Q8C7R7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfx6Q8C7R7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfx6Q8C7R7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfx6Q8C7R7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rfx6Q8C7R7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rfx6Q8C7R7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfx6Q8C7R7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.04■■□□□ 1.28
Rfx6Q8C7R7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfx6Q8C7R7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.04■■□□□ 1.28
Rfx6Q8C7R7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfx6Q8C7R7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rfx6Q8C7R7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Rfx6Q8C7R7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Rfx6Q8C7R7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rfx6Q8C7R7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rfx6Q8C7R7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rfx6Q8C7R7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rfx6Q8C7R7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms