Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pabpc5Q8C7D3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pabpc5Q8C7D3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pabpc5Q8C7D3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.86■■□□□ 1.25
Pabpc5Q8C7D3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.86■■□□□ 1.25
Pabpc5Q8C7D3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.84■■□□□ 1.25
Pabpc5Q8C7D3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pabpc5Q8C7D3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Pabpc5Q8C7D3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pabpc5Q8C7D3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pabpc5Q8C7D3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.84■■□□□ 1.25
Pabpc5Q8C7D3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.84■■□□□ 1.25
Pabpc5Q8C7D3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpc5Q8C7D3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpc5Q8C7D3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpc5Q8C7D3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpc5Q8C7D3 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.83■■□□□ 1.25
Pabpc5Q8C7D3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pabpc5Q8C7D3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpc5Q8C7D3 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.82■■□□□ 1.24
Pabpc5Q8C7D3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpc5Q8C7D3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpc5Q8C7D3 Mir3960-201ENSMUST00000198213 73 ntBASIC22.81■■□□□ 1.24
Pabpc5Q8C7D3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pabpc5Q8C7D3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.81■■□□□ 1.24
Pabpc5Q8C7D3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pabpc5Q8C7D3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pabpc5Q8C7D3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Pabpc5Q8C7D3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pabpc5Q8C7D3 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.8■■□□□ 1.24
Pabpc5Q8C7D3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pabpc5Q8C7D3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Pabpc5Q8C7D3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pabpc5Q8C7D3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Pabpc5Q8C7D3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.79■■□□□ 1.24
Pabpc5Q8C7D3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.79■■□□□ 1.24
Pabpc5Q8C7D3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pabpc5Q8C7D3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pabpc5Q8C7D3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pabpc5Q8C7D3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.78■■□□□ 1.24
Pabpc5Q8C7D3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pabpc5Q8C7D3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pabpc5Q8C7D3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Pabpc5Q8C7D3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pabpc5Q8C7D3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Pabpc5Q8C7D3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pabpc5Q8C7D3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.76■■□□□ 1.23
Pabpc5Q8C7D3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pabpc5Q8C7D3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pabpc5Q8C7D3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.76■■□□□ 1.23
Pabpc5Q8C7D3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pabpc5Q8C7D3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pabpc5Q8C7D3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pabpc5Q8C7D3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pabpc5Q8C7D3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pabpc5Q8C7D3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pabpc5Q8C7D3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Pabpc5Q8C7D3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.74■■□□□ 1.23
Pabpc5Q8C7D3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pabpc5Q8C7D3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pabpc5Q8C7D3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pabpc5Q8C7D3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pabpc5Q8C7D3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pabpc5Q8C7D3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pabpc5Q8C7D3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pabpc5Q8C7D3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pabpc5Q8C7D3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pabpc5Q8C7D3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pabpc5Q8C7D3 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.72■■□□□ 1.23
Pabpc5Q8C7D3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pabpc5Q8C7D3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pabpc5Q8C7D3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pabpc5Q8C7D3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pabpc5Q8C7D3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
Pabpc5Q8C7D3 Gm45364-201ENSMUST00000210883 159 ntBASIC22.71■■□□□ 1.23
Pabpc5Q8C7D3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pabpc5Q8C7D3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pabpc5Q8C7D3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pabpc5Q8C7D3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pabpc5Q8C7D3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pabpc5Q8C7D3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpc5Q8C7D3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpc5Q8C7D3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpc5Q8C7D3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpc5Q8C7D3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpc5Q8C7D3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pabpc5Q8C7D3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpc5Q8C7D3 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.68■■□□□ 1.22
Pabpc5Q8C7D3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pabpc5Q8C7D3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Pabpc5Q8C7D3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pabpc5Q8C7D3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pabpc5Q8C7D3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pabpc5Q8C7D3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pabpc5Q8C7D3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pabpc5Q8C7D3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Pabpc5Q8C7D3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pabpc5Q8C7D3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.64■■□□□ 1.21
Pabpc5Q8C7D3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pabpc5Q8C7D3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms