Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smim4Q8C1Q6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim4Q8C1Q6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smim4Q8C1Q6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim4Q8C1Q6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim4Q8C1Q6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim4Q8C1Q6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.15■□□□□ 0.66
Smim4Q8C1Q6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smim4Q8C1Q6 Nkain2-201ENSMUST00000092602 558 ntBASIC19.15■□□□□ 0.66
Smim4Q8C1Q6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim4Q8C1Q6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim4Q8C1Q6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim4Q8C1Q6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Smim4Q8C1Q6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smim4Q8C1Q6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smim4Q8C1Q6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smim4Q8C1Q6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smim4Q8C1Q6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Smim4Q8C1Q6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smim4Q8C1Q6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smim4Q8C1Q6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smim4Q8C1Q6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smim4Q8C1Q6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smim4Q8C1Q6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smim4Q8C1Q6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smim4Q8C1Q6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.09■□□□□ 0.65
Smim4Q8C1Q6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smim4Q8C1Q6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Smim4Q8C1Q6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smim4Q8C1Q6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smim4Q8C1Q6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smim4Q8C1Q6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smim4Q8C1Q6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smim4Q8C1Q6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smim4Q8C1Q6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.07■□□□□ 0.64
Smim4Q8C1Q6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smim4Q8C1Q6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Smim4Q8C1Q6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smim4Q8C1Q6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smim4Q8C1Q6 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.06■□□□□ 0.64
Smim4Q8C1Q6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.06■□□□□ 0.64
Smim4Q8C1Q6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.06■□□□□ 0.64
Smim4Q8C1Q6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.06■□□□□ 0.64
Smim4Q8C1Q6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smim4Q8C1Q6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smim4Q8C1Q6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Smim4Q8C1Q6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.05■□□□□ 0.64
Smim4Q8C1Q6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim4Q8C1Q6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim4Q8C1Q6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.04■□□□□ 0.64
Smim4Q8C1Q6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim4Q8C1Q6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smim4Q8C1Q6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Smim4Q8C1Q6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim4Q8C1Q6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smim4Q8C1Q6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Smim4Q8C1Q6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smim4Q8C1Q6 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.02■□□□□ 0.64
Smim4Q8C1Q6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smim4Q8C1Q6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smim4Q8C1Q6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smim4Q8C1Q6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.02■□□□□ 0.64
Smim4Q8C1Q6 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.02■□□□□ 0.64
Smim4Q8C1Q6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smim4Q8C1Q6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smim4Q8C1Q6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Smim4Q8C1Q6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smim4Q8C1Q6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Smim4Q8C1Q6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smim4Q8C1Q6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smim4Q8C1Q6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smim4Q8C1Q6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smim4Q8C1Q6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smim4Q8C1Q6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.99■□□□□ 0.63
Smim4Q8C1Q6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smim4Q8C1Q6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smim4Q8C1Q6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smim4Q8C1Q6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smim4Q8C1Q6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smim4Q8C1Q6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smim4Q8C1Q6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.98■□□□□ 0.63
Smim4Q8C1Q6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Smim4Q8C1Q6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smim4Q8C1Q6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smim4Q8C1Q6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smim4Q8C1Q6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smim4Q8C1Q6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smim4Q8C1Q6 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.97■□□□□ 0.63
Smim4Q8C1Q6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smim4Q8C1Q6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smim4Q8C1Q6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smim4Q8C1Q6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smim4Q8C1Q6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Smim4Q8C1Q6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smim4Q8C1Q6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smim4Q8C1Q6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smim4Q8C1Q6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smim4Q8C1Q6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smim4Q8C1Q6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smim4Q8C1Q6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms