Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh3rf2Q8BZT2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh3rf2Q8BZT2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh3rf2Q8BZT2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.51■■□□□ 1.35
Sh3rf2Q8BZT2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh3rf2Q8BZT2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
Sh3rf2Q8BZT2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sh3rf2Q8BZT2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Sh3rf2Q8BZT2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.49■■□□□ 1.35
Sh3rf2Q8BZT2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sh3rf2Q8BZT2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sh3rf2Q8BZT2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.49■■□□□ 1.35
Sh3rf2Q8BZT2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sh3rf2Q8BZT2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sh3rf2Q8BZT2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sh3rf2Q8BZT2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sh3rf2Q8BZT2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sh3rf2Q8BZT2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3rf2Q8BZT2 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.47■■□□□ 1.35
Sh3rf2Q8BZT2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3rf2Q8BZT2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Sh3rf2Q8BZT2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Sh3rf2Q8BZT2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Sh3rf2Q8BZT2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.34
Sh3rf2Q8BZT2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sh3rf2Q8BZT2 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.45■■□□□ 1.34
Sh3rf2Q8BZT2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sh3rf2Q8BZT2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 Terc-201ENSMUST00000082862 423 ntBASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3rf2Q8BZT2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sh3rf2Q8BZT2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Sh3rf2Q8BZT2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sh3rf2Q8BZT2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sh3rf2Q8BZT2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.42■■□□□ 1.34
Sh3rf2Q8BZT2 Gm7332-201ENSMUST00000118351 454 ntBASIC23.42■■□□□ 1.34
Sh3rf2Q8BZT2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Sh3rf2Q8BZT2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sh3rf2Q8BZT2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.41■■□□□ 1.34
Sh3rf2Q8BZT2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sh3rf2Q8BZT2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sh3rf2Q8BZT2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sh3rf2Q8BZT2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3rf2Q8BZT2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3rf2Q8BZT2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Sh3rf2Q8BZT2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Sh3rf2Q8BZT2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Sh3rf2Q8BZT2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
Sh3rf2Q8BZT2 Gm14523-201ENSMUST00000117260 558 ntBASIC23.39■■□□□ 1.33
Sh3rf2Q8BZT2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.39■■□□□ 1.33
Sh3rf2Q8BZT2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.39■■□□□ 1.33
Sh3rf2Q8BZT2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh3rf2Q8BZT2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh3rf2Q8BZT2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Sh3rf2Q8BZT2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3rf2Q8BZT2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3rf2Q8BZT2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3rf2Q8BZT2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3rf2Q8BZT2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3rf2Q8BZT2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3rf2Q8BZT2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.37■■□□□ 1.33
Sh3rf2Q8BZT2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3rf2Q8BZT2 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.37■■□□□ 1.33
Sh3rf2Q8BZT2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3rf2Q8BZT2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3rf2Q8BZT2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3rf2Q8BZT2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sh3rf2Q8BZT2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sh3rf2Q8BZT2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sh3rf2Q8BZT2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3rf2Q8BZT2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3rf2Q8BZT2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3rf2Q8BZT2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.35■■□□□ 1.33
Sh3rf2Q8BZT2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3rf2Q8BZT2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sh3rf2Q8BZT2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sh3rf2Q8BZT2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.33■■□□□ 1.33
Sh3rf2Q8BZT2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.33■■□□□ 1.33
Sh3rf2Q8BZT2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Sh3rf2Q8BZT2 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.33■■□□□ 1.32
Sh3rf2Q8BZT2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3rf2Q8BZT2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3rf2Q8BZT2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Sh3rf2Q8BZT2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3rf2Q8BZT2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.31■■□□□ 1.32
Sh3rf2Q8BZT2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3rf2Q8BZT2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Sh3rf2Q8BZT2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3rf2Q8BZT2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3rf2Q8BZT2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.29■■□□□ 1.32
Sh3rf2Q8BZT2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms