Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cldn34b3Q80ZS5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cldn34b3Q80ZS5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cldn34b3Q80ZS5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cldn34b3Q80ZS5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cldn34b3Q80ZS5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cldn34b3Q80ZS5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn34b3Q80ZS5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Cldn34b3Q80ZS5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.35■■□□□ 1.01
Cldn34b3Q80ZS5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cldn34b3Q80ZS5 Gm4799-201ENSMUST00000095396 657 ntBASIC21.34■■□□□ 1.01
Cldn34b3Q80ZS5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Cldn34b3Q80ZS5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cldn34b3Q80ZS5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cldn34b3Q80ZS5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cldn34b3Q80ZS5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.33■■□□□ 1.01
Cldn34b3Q80ZS5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cldn34b3Q80ZS5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cldn34b3Q80ZS5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Cldn34b3Q80ZS5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cldn34b3Q80ZS5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.32■■□□□ 1
Cldn34b3Q80ZS5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cldn34b3Q80ZS5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cldn34b3Q80ZS5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cldn34b3Q80ZS5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Cldn34b3Q80ZS5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cldn34b3Q80ZS5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.31■■□□□ 1
Cldn34b3Q80ZS5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cldn34b3Q80ZS5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Cldn34b3Q80ZS5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cldn34b3Q80ZS5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Cldn34b3Q80ZS5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cldn34b3Q80ZS5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cldn34b3Q80ZS5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cldn34b3Q80ZS5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cldn34b3Q80ZS5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cldn34b3Q80ZS5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cldn34b3Q80ZS5 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.29■■□□□ 1
Cldn34b3Q80ZS5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.29■■□□□ 1
Cldn34b3Q80ZS5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cldn34b3Q80ZS5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.29■■□□□ 1
Cldn34b3Q80ZS5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cldn34b3Q80ZS5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cldn34b3Q80ZS5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.28■■□□□ 1
Cldn34b3Q80ZS5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cldn34b3Q80ZS5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cldn34b3Q80ZS5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldn34b3Q80ZS5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cldn34b3Q80ZS5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cldn34b3Q80ZS5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Cldn34b3Q80ZS5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cldn34b3Q80ZS5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cldn34b3Q80ZS5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cldn34b3Q80ZS5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cldn34b3Q80ZS5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Cldn34b3Q80ZS5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.26■□□□□ 0.99
Cldn34b3Q80ZS5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn34b3Q80ZS5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.26■□□□□ 0.99
Cldn34b3Q80ZS5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.26■□□□□ 0.99
Cldn34b3Q80ZS5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Cldn34b3Q80ZS5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cldn34b3Q80ZS5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldn34b3Q80ZS5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.24■□□□□ 0.99
Cldn34b3Q80ZS5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn34b3Q80ZS5 Mir3960-201ENSMUST00000198213 73 ntBASIC21.23■□□□□ 0.99
Cldn34b3Q80ZS5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn34b3Q80ZS5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn34b3Q80ZS5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cldn34b3Q80ZS5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn34b3Q80ZS5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn34b3Q80ZS5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn34b3Q80ZS5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn34b3Q80ZS5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn34b3Q80ZS5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.22■□□□□ 0.99
Cldn34b3Q80ZS5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn34b3Q80ZS5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn34b3Q80ZS5 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.21■□□□□ 0.99
Cldn34b3Q80ZS5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.21■□□□□ 0.99
Cldn34b3Q80ZS5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn34b3Q80ZS5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn34b3Q80ZS5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn34b3Q80ZS5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Cldn34b3Q80ZS5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cldn34b3Q80ZS5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn34b3Q80ZS5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn34b3Q80ZS5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.19■□□□□ 0.98
Cldn34b3Q80ZS5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn34b3Q80ZS5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn34b3Q80ZS5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn34b3Q80ZS5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn34b3Q80ZS5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn34b3Q80ZS5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn34b3Q80ZS5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.16■□□□□ 0.98
Cldn34b3Q80ZS5 Gm9812-201ENSMUST00000061934 968 ntBASIC21.16■□□□□ 0.98
Cldn34b3Q80ZS5 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.15■□□□□ 0.98
Cldn34b3Q80ZS5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn34b3Q80ZS5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn34b3Q80ZS5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn34b3Q80ZS5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cldn34b3Q80ZS5 Gm45364-201ENSMUST00000210883 159 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms