Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Trnp1Q80ZI1 Terc-201ENSMUST00000082862 423 ntBASIC26.83■■□□□ 1.89
Trnp1Q80ZI1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.83■■□□□ 1.89
Trnp1Q80ZI1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.82■■□□□ 1.88
Trnp1Q80ZI1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trnp1Q80ZI1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trnp1Q80ZI1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trnp1Q80ZI1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Trnp1Q80ZI1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trnp1Q80ZI1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.88
Trnp1Q80ZI1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Trnp1Q80ZI1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Trnp1Q80ZI1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Trnp1Q80ZI1 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.79■■□□□ 1.88
Trnp1Q80ZI1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Trnp1Q80ZI1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trnp1Q80ZI1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Trnp1Q80ZI1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Trnp1Q80ZI1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
Trnp1Q80ZI1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.75■■□□□ 1.87
Trnp1Q80ZI1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.75■■□□□ 1.87
Trnp1Q80ZI1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Trnp1Q80ZI1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Trnp1Q80ZI1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.74■■□□□ 1.87
Trnp1Q80ZI1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Trnp1Q80ZI1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Trnp1Q80ZI1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Trnp1Q80ZI1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.73■■□□□ 1.87
Trnp1Q80ZI1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
Trnp1Q80ZI1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Trnp1Q80ZI1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.71■■□□□ 1.87
Trnp1Q80ZI1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Trnp1Q80ZI1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.7■■□□□ 1.86
Trnp1Q80ZI1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Trnp1Q80ZI1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Trnp1Q80ZI1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.69■■□□□ 1.86
Trnp1Q80ZI1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Trnp1Q80ZI1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.69■■□□□ 1.86
Trnp1Q80ZI1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.69■■□□□ 1.86
Trnp1Q80ZI1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trnp1Q80ZI1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trnp1Q80ZI1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Trnp1Q80ZI1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Trnp1Q80ZI1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trnp1Q80ZI1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.67■■□□□ 1.86
Trnp1Q80ZI1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trnp1Q80ZI1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trnp1Q80ZI1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trnp1Q80ZI1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.66■■□□□ 1.86
Trnp1Q80ZI1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trnp1Q80ZI1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Trnp1Q80ZI1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Trnp1Q80ZI1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Trnp1Q80ZI1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.65■■□□□ 1.86
Trnp1Q80ZI1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Trnp1Q80ZI1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.64■■□□□ 1.86
Trnp1Q80ZI1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Trnp1Q80ZI1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trnp1Q80ZI1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Trnp1Q80ZI1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.63■■□□□ 1.85
Trnp1Q80ZI1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Trnp1Q80ZI1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trnp1Q80ZI1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trnp1Q80ZI1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Trnp1Q80ZI1 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.62■■□□□ 1.85
Trnp1Q80ZI1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Trnp1Q80ZI1 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.62■■□□□ 1.85
Trnp1Q80ZI1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.61■■□□□ 1.85
Trnp1Q80ZI1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trnp1Q80ZI1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.6■■□□□ 1.85
Trnp1Q80ZI1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Trnp1Q80ZI1 Gm44428-201ENSMUST00000204474 874 ntBASIC26.6■■□□□ 1.85
Trnp1Q80ZI1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Trnp1Q80ZI1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Trnp1Q80ZI1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.59■■□□□ 1.85
Trnp1Q80ZI1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trnp1Q80ZI1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Trnp1Q80ZI1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trnp1Q80ZI1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Trnp1Q80ZI1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trnp1Q80ZI1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trnp1Q80ZI1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trnp1Q80ZI1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.56■■□□□ 1.84
Trnp1Q80ZI1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Trnp1Q80ZI1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Trnp1Q80ZI1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trnp1Q80ZI1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trnp1Q80ZI1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trnp1Q80ZI1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trnp1Q80ZI1 Gm43566-201ENSMUST00000196851 808 ntBASIC26.54■■□□□ 1.84
Trnp1Q80ZI1 Rps24-207ENSMUST00000224568 714 ntBASIC26.54■■□□□ 1.84
Trnp1Q80ZI1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trnp1Q80ZI1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trnp1Q80ZI1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
Trnp1Q80ZI1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trnp1Q80ZI1 Gm13238-201ENSMUST00000117655 780 ntBASIC26.53■■□□□ 1.84
Trnp1Q80ZI1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.53■■□□□ 1.84
Trnp1Q80ZI1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trnp1Q80ZI1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trnp1Q80ZI1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms