Protein–RNA interactions for Protein: Q80XU8

Lrfn4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn4Q80XU8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lrfn4Q80XU8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrfn4Q80XU8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lrfn4Q80XU8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrfn4Q80XU8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrfn4Q80XU8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrfn4Q80XU8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrfn4Q80XU8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrfn4Q80XU8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lrfn4Q80XU8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrfn4Q80XU8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrfn4Q80XU8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrfn4Q80XU8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Lrfn4Q80XU8 Gm7432-201ENSMUST00000210343 879 ntBASIC20.33■□□□□ 0.85
Lrfn4Q80XU8 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.33■□□□□ 0.84
Lrfn4Q80XU8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrfn4Q80XU8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrfn4Q80XU8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lrfn4Q80XU8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrfn4Q80XU8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Lrfn4Q80XU8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrfn4Q80XU8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrfn4Q80XU8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrfn4Q80XU8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrfn4Q80XU8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrfn4Q80XU8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Lrfn4Q80XU8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Lrfn4Q80XU8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Lrfn4Q80XU8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.3■□□□□ 0.84
Lrfn4Q80XU8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrfn4Q80XU8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Lrfn4Q80XU8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrfn4Q80XU8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrfn4Q80XU8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.29■□□□□ 0.84
Lrfn4Q80XU8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.29■□□□□ 0.84
Lrfn4Q80XU8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrfn4Q80XU8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrfn4Q80XU8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrfn4Q80XU8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Lrfn4Q80XU8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrfn4Q80XU8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lrfn4Q80XU8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lrfn4Q80XU8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrfn4Q80XU8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lrfn4Q80XU8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrfn4Q80XU8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Lrfn4Q80XU8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.25■□□□□ 0.83
Lrfn4Q80XU8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrfn4Q80XU8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrfn4Q80XU8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrfn4Q80XU8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.24■□□□□ 0.83
Lrfn4Q80XU8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrfn4Q80XU8 Gm11599-201ENSMUST00000118720 878 ntBASIC20.24■□□□□ 0.83
Lrfn4Q80XU8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrfn4Q80XU8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrfn4Q80XU8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Lrfn4Q80XU8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrfn4Q80XU8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrfn4Q80XU8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrfn4Q80XU8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lrfn4Q80XU8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrfn4Q80XU8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrfn4Q80XU8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lrfn4Q80XU8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lrfn4Q80XU8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lrfn4Q80XU8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lrfn4Q80XU8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrfn4Q80XU8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrfn4Q80XU8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrfn4Q80XU8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Lrfn4Q80XU8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lrfn4Q80XU8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrfn4Q80XU8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrfn4Q80XU8 Gm4799-201ENSMUST00000095396 657 ntBASIC20.2■□□□□ 0.82
Lrfn4Q80XU8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lrfn4Q80XU8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrfn4Q80XU8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Lrfn4Q80XU8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn4Q80XU8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn4Q80XU8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn4Q80XU8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrfn4Q80XU8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lrfn4Q80XU8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.18■□□□□ 0.82
Lrfn4Q80XU8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lrfn4Q80XU8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lrfn4Q80XU8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrfn4Q80XU8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrfn4Q80XU8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lrfn4Q80XU8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.17■□□□□ 0.82
Lrfn4Q80XU8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrfn4Q80XU8 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.16■□□□□ 0.82
Lrfn4Q80XU8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lrfn4Q80XU8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrfn4Q80XU8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrfn4Q80XU8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrfn4Q80XU8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Lrfn4Q80XU8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrfn4Q80XU8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrfn4Q80XU8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrfn4Q80XU8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms