Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.79■■□□□ 1.72
Usp6nlQ80XC3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
Usp6nlQ80XC3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Usp6nlQ80XC3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Usp6nlQ80XC3 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.78■■□□□ 1.72
Usp6nlQ80XC3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.78■■□□□ 1.72
Usp6nlQ80XC3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.78■■□□□ 1.72
Usp6nlQ80XC3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Usp6nlQ80XC3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Usp6nlQ80XC3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Usp6nlQ80XC3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Usp6nlQ80XC3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Usp6nlQ80XC3 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.77■■□□□ 1.72
Usp6nlQ80XC3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Usp6nlQ80XC3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Usp6nlQ80XC3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Usp6nlQ80XC3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Usp6nlQ80XC3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Usp6nlQ80XC3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Usp6nlQ80XC3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Usp6nlQ80XC3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
Usp6nlQ80XC3 Terc-201ENSMUST00000082862 423 ntBASIC25.74■■□□□ 1.71
Usp6nlQ80XC3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Usp6nlQ80XC3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Usp6nlQ80XC3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Usp6nlQ80XC3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Usp6nlQ80XC3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Usp6nlQ80XC3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 Gm10420-201ENSMUST00000121713 882 ntBASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Usp6nlQ80XC3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.71■■□□□ 1.71
Usp6nlQ80XC3 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.71■■□□□ 1.71
Usp6nlQ80XC3 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.71■■□□□ 1.71
Usp6nlQ80XC3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.7■■□□□ 1.71
Usp6nlQ80XC3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Usp6nlQ80XC3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Usp6nlQ80XC3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Usp6nlQ80XC3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp6nlQ80XC3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp6nlQ80XC3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp6nlQ80XC3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Usp6nlQ80XC3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.67■■□□□ 1.7
Usp6nlQ80XC3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Usp6nlQ80XC3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Usp6nlQ80XC3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Usp6nlQ80XC3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Usp6nlQ80XC3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp6nlQ80XC3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp6nlQ80XC3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp6nlQ80XC3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Usp6nlQ80XC3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Usp6nlQ80XC3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Usp6nlQ80XC3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Usp6nlQ80XC3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Usp6nlQ80XC3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.63■■□□□ 1.69
Usp6nlQ80XC3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.63■■□□□ 1.69
Usp6nlQ80XC3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Usp6nlQ80XC3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.62■■□□□ 1.69
Usp6nlQ80XC3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.62■■□□□ 1.69
Usp6nlQ80XC3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Usp6nlQ80XC3 Gm5921-201ENSMUST00000075898 882 ntBASIC25.61■■□□□ 1.69
Usp6nlQ80XC3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Usp6nlQ80XC3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Usp6nlQ80XC3 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.61■■□□□ 1.69
Usp6nlQ80XC3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Usp6nlQ80XC3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Usp6nlQ80XC3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Usp6nlQ80XC3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Usp6nlQ80XC3 Gm5812-201ENSMUST00000061073 957 ntBASIC25.59■■□□□ 1.69
Usp6nlQ80XC3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Usp6nlQ80XC3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Usp6nlQ80XC3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.59■■□□□ 1.69
Usp6nlQ80XC3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.58■■□□□ 1.69
Usp6nlQ80XC3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Usp6nlQ80XC3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Usp6nlQ80XC3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Usp6nlQ80XC3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Usp6nlQ80XC3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp6nlQ80XC3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp6nlQ80XC3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp6nlQ80XC3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Usp6nlQ80XC3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.55■■□□□ 1.68
Usp6nlQ80XC3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Usp6nlQ80XC3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp6nlQ80XC3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp6nlQ80XC3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Usp6nlQ80XC3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Usp6nlQ80XC3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Usp6nlQ80XC3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Usp6nlQ80XC3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Usp6nlQ80XC3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Usp6nlQ80XC3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.51■■□□□ 1.67
Usp6nlQ80XC3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.51■■□□□ 1.67
Usp6nlQ80XC3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.5■■□□□ 1.67
Usp6nlQ80XC3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Usp6nlQ80XC3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms