Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim36Q80WG7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim36Q80WG7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim36Q80WG7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim36Q80WG7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Trim36Q80WG7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim36Q80WG7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim36Q80WG7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim36Q80WG7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim36Q80WG7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim36Q80WG7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim36Q80WG7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim36Q80WG7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim36Q80WG7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim36Q80WG7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Trim36Q80WG7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim36Q80WG7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim36Q80WG7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Trim36Q80WG7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim36Q80WG7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.94■■□□□ 1.1
Trim36Q80WG7 Gm30023-201ENSMUST00000197970 889 ntBASIC21.94■■□□□ 1.1
Trim36Q80WG7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim36Q80WG7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.93■■□□□ 1.1
Trim36Q80WG7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim36Q80WG7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim36Q80WG7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.93■■□□□ 1.1
Trim36Q80WG7 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.93■■□□□ 1.1
Trim36Q80WG7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim36Q80WG7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
Trim36Q80WG7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim36Q80WG7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim36Q80WG7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim36Q80WG7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim36Q80WG7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim36Q80WG7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.9■■□□□ 1.1
Trim36Q80WG7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim36Q80WG7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Trim36Q80WG7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Trim36Q80WG7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Trim36Q80WG7 Gm7432-201ENSMUST00000210343 879 ntBASIC21.89■■□□□ 1.09
Trim36Q80WG7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim36Q80WG7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim36Q80WG7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim36Q80WG7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim36Q80WG7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim36Q80WG7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim36Q80WG7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim36Q80WG7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trim36Q80WG7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim36Q80WG7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim36Q80WG7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim36Q80WG7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim36Q80WG7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim36Q80WG7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim36Q80WG7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim36Q80WG7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Trim36Q80WG7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Trim36Q80WG7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Trim36Q80WG7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim36Q80WG7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim36Q80WG7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim36Q80WG7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Trim36Q80WG7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim36Q80WG7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim36Q80WG7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim36Q80WG7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Trim36Q80WG7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim36Q80WG7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Trim36Q80WG7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim36Q80WG7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim36Q80WG7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim36Q80WG7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim36Q80WG7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim36Q80WG7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms