Protein–RNA interactions for Protein: Q6PGE7

Slc6a7, Sodium-dependent proline transporter, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a7Q6PGE7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a7Q6PGE7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.77■□□□□ 0.92
Slc6a7Q6PGE7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a7Q6PGE7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.77■□□□□ 0.91
Slc6a7Q6PGE7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a7Q6PGE7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a7Q6PGE7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a7Q6PGE7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a7Q6PGE7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Slc6a7Q6PGE7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a7Q6PGE7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a7Q6PGE7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a7Q6PGE7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a7Q6PGE7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a7Q6PGE7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a7Q6PGE7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a7Q6PGE7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a7Q6PGE7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Slc6a7Q6PGE7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a7Q6PGE7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a7Q6PGE7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a7Q6PGE7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a7Q6PGE7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Slc6a7Q6PGE7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a7Q6PGE7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a7Q6PGE7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a7Q6PGE7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a7Q6PGE7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a7Q6PGE7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a7Q6PGE7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Slc6a7Q6PGE7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a7Q6PGE7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a7Q6PGE7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a7Q6PGE7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a7Q6PGE7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Slc6a7Q6PGE7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Slc6a7Q6PGE7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Slc6a7Q6PGE7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a7Q6PGE7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a7Q6PGE7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a7Q6PGE7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Slc6a7Q6PGE7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a7Q6PGE7 Gm7432-201ENSMUST00000210343 879 ntBASIC20.68■□□□□ 0.9
Slc6a7Q6PGE7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a7Q6PGE7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a7Q6PGE7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a7Q6PGE7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a7Q6PGE7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a7Q6PGE7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Slc6a7Q6PGE7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a7Q6PGE7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a7Q6PGE7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a7Q6PGE7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Slc6a7Q6PGE7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
Slc6a7Q6PGE7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a7Q6PGE7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a7Q6PGE7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Slc6a7Q6PGE7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.64■□□□□ 0.89
Slc6a7Q6PGE7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a7Q6PGE7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.63■□□□□ 0.89
Slc6a7Q6PGE7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a7Q6PGE7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.63■□□□□ 0.89
Slc6a7Q6PGE7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a7Q6PGE7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a7Q6PGE7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a7Q6PGE7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a7Q6PGE7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Slc6a7Q6PGE7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a7Q6PGE7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a7Q6PGE7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.59■□□□□ 0.89
Slc6a7Q6PGE7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Slc6a7Q6PGE7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Slc6a7Q6PGE7 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.59■□□□□ 0.89
Slc6a7Q6PGE7 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.59■□□□□ 0.89
Slc6a7Q6PGE7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Slc6a7Q6PGE7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a7Q6PGE7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.58■□□□□ 0.89
Slc6a7Q6PGE7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a7Q6PGE7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a7Q6PGE7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a7Q6PGE7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc6a7Q6PGE7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a7Q6PGE7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a7Q6PGE7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a7Q6PGE7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a7Q6PGE7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Slc6a7Q6PGE7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Slc6a7Q6PGE7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a7Q6PGE7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a7Q6PGE7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.56■□□□□ 0.88
Slc6a7Q6PGE7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a7Q6PGE7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a7Q6PGE7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a7Q6PGE7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Slc6a7Q6PGE7 Gm11599-201ENSMUST00000118720 878 ntBASIC20.55■□□□□ 0.88
Slc6a7Q6PGE7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a7Q6PGE7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a7Q6PGE7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Slc6a7Q6PGE7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a7Q6PGE7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms