Protein–RNA interactions for Protein: Q62521

Zic3, Zinc finger protein ZIC 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic3Q62521 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zic3Q62521 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zic3Q62521 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zic3Q62521 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Zic3Q62521 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zic3Q62521 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zic3Q62521 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Zic3Q62521 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zic3Q62521 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zic3Q62521 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zic3Q62521 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zic3Q62521 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zic3Q62521 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zic3Q62521 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zic3Q62521 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zic3Q62521 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zic3Q62521 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zic3Q62521 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zic3Q62521 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zic3Q62521 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zic3Q62521 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zic3Q62521 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.23■□□□□ 0.67
Zic3Q62521 Gm4799-201ENSMUST00000095396 657 ntBASIC19.23■□□□□ 0.67
Zic3Q62521 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Zic3Q62521 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zic3Q62521 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zic3Q62521 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.22■□□□□ 0.67
Zic3Q62521 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zic3Q62521 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.22■□□□□ 0.67
Zic3Q62521 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zic3Q62521 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zic3Q62521 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Zic3Q62521 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zic3Q62521 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.21■□□□□ 0.67
Zic3Q62521 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zic3Q62521 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zic3Q62521 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Zic3Q62521 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zic3Q62521 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zic3Q62521 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Zic3Q62521 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zic3Q62521 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Zic3Q62521 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.19■□□□□ 0.66
Zic3Q62521 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zic3Q62521 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zic3Q62521 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Zic3Q62521 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Zic3Q62521 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.18■□□□□ 0.66
Zic3Q62521 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Zic3Q62521 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.18■□□□□ 0.66
Zic3Q62521 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Zic3Q62521 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zic3Q62521 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Zic3Q62521 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zic3Q62521 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zic3Q62521 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zic3Q62521 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.17■□□□□ 0.66
Zic3Q62521 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Zic3Q62521 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Zic3Q62521 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zic3Q62521 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zic3Q62521 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zic3Q62521 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zic3Q62521 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zic3Q62521 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zic3Q62521 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zic3Q62521 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zic3Q62521 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zic3Q62521 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zic3Q62521 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.14■□□□□ 0.65
Zic3Q62521 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.14■□□□□ 0.65
Zic3Q62521 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zic3Q62521 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Zic3Q62521 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zic3Q62521 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Zic3Q62521 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Zic3Q62521 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zic3Q62521 Mir3960-201ENSMUST00000198213 73 ntBASIC19.12■□□□□ 0.65
Zic3Q62521 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.12■□□□□ 0.65
Zic3Q62521 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zic3Q62521 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zic3Q62521 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.12■□□□□ 0.65
Zic3Q62521 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zic3Q62521 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zic3Q62521 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.11■□□□□ 0.65
Zic3Q62521 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.11■□□□□ 0.65
Zic3Q62521 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zic3Q62521 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zic3Q62521 Gm9812-201ENSMUST00000061934 968 ntBASIC19.1■□□□□ 0.65
Zic3Q62521 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zic3Q62521 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.09■□□□□ 0.65
Zic3Q62521 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.08■□□□□ 0.65
Zic3Q62521 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Zic3Q62521 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Zic3Q62521 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Zic3Q62521 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Zic3Q62521 Gm45364-201ENSMUST00000210883 159 ntBASIC19.06■□□□□ 0.64
Zic3Q62521 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.06■□□□□ 0.64
Zic3Q62521 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Zic3Q62521 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms