Protein–RNA interactions for Protein: Q62513

Znf260, Zinc finger protein 260, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf260Q62513 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Znf260Q62513 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Znf260Q62513 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Znf260Q62513 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.51■□□□□ 0.87
Znf260Q62513 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.51■□□□□ 0.87
Znf260Q62513 Terc-201ENSMUST00000082862 423 ntBASIC20.51■□□□□ 0.87
Znf260Q62513 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.5■□□□□ 0.87
Znf260Q62513 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Znf260Q62513 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Znf260Q62513 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Znf260Q62513 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Znf260Q62513 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf260Q62513 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf260Q62513 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf260Q62513 Gm5921-201ENSMUST00000075898 882 ntBASIC20.49■□□□□ 0.87
Znf260Q62513 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Znf260Q62513 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Znf260Q62513 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
Znf260Q62513 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.48■□□□□ 0.87
Znf260Q62513 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Znf260Q62513 Gm5812-201ENSMUST00000061073 957 ntBASIC20.48■□□□□ 0.87
Znf260Q62513 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Znf260Q62513 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Znf260Q62513 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Znf260Q62513 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Znf260Q62513 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.47■□□□□ 0.87
Znf260Q62513 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Znf260Q62513 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Znf260Q62513 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.46■□□□□ 0.87
Znf260Q62513 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Znf260Q62513 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Znf260Q62513 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Znf260Q62513 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Znf260Q62513 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Znf260Q62513 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.45■□□□□ 0.86
Znf260Q62513 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Znf260Q62513 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Znf260Q62513 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Znf260Q62513 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Znf260Q62513 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Znf260Q62513 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Znf260Q62513 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.43■□□□□ 0.86
Znf260Q62513 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Znf260Q62513 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Znf260Q62513 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Znf260Q62513 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Znf260Q62513 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Znf260Q62513 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Znf260Q62513 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Znf260Q62513 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Znf260Q62513 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Znf260Q62513 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.4■□□□□ 0.86
Znf260Q62513 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.4■□□□□ 0.86
Znf260Q62513 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.4■□□□□ 0.86
Znf260Q62513 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Znf260Q62513 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Znf260Q62513 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Znf260Q62513 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Znf260Q62513 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Znf260Q62513 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Znf260Q62513 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Znf260Q62513 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Znf260Q62513 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Znf260Q62513 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.38■□□□□ 0.85
Znf260Q62513 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.38■□□□□ 0.85
Znf260Q62513 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Znf260Q62513 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.38■□□□□ 0.85
Znf260Q62513 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Znf260Q62513 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Znf260Q62513 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Znf260Q62513 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.37■□□□□ 0.85
Znf260Q62513 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Znf260Q62513 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
Znf260Q62513 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.35■□□□□ 0.85
Znf260Q62513 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Znf260Q62513 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Znf260Q62513 Gm44428-201ENSMUST00000204474 874 ntBASIC20.34■□□□□ 0.85
Znf260Q62513 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf260Q62513 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf260Q62513 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Znf260Q62513 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Znf260Q62513 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Znf260Q62513 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf260Q62513 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Znf260Q62513 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf260Q62513 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf260Q62513 Gm15546-201ENSMUST00000122095 826 ntBASIC20.31■□□□□ 0.84
Znf260Q62513 Gm22567-201ENSMUST00000175542 342 ntBASIC20.31■□□□□ 0.84
Znf260Q62513 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf260Q62513 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf260Q62513 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf260Q62513 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.31■□□□□ 0.84
Znf260Q62513 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Znf260Q62513 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Znf260Q62513 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.3■□□□□ 0.84
Znf260Q62513 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Znf260Q62513 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Znf260Q62513 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Znf260Q62513 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Znf260Q62513 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms