Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxc1Q61572 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Foxc1Q61572 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Foxc1Q61572 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Foxc1Q61572 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxc1Q61572 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxc1Q61572 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxc1Q61572 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.59■□□□□ 0.25
Foxc1Q61572 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.59■□□□□ 0.25
Foxc1Q61572 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Foxc1Q61572 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Foxc1Q61572 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Foxc1Q61572 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Foxc1Q61572 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxc1Q61572 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Foxc1Q61572 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxc1Q61572 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxc1Q61572 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxc1Q61572 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxc1Q61572 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxc1Q61572 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxc1Q61572 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.55■□□□□ 0.24
Foxc1Q61572 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxc1Q61572 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxc1Q61572 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxc1Q61572 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Foxc1Q61572 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.54■□□□□ 0.24
Foxc1Q61572 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Foxc1Q61572 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.54■□□□□ 0.24
Foxc1Q61572 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxc1Q61572 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxc1Q61572 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxc1Q61572 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Foxc1Q61572 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Foxc1Q61572 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Foxc1Q61572 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.52■□□□□ 0.24
Foxc1Q61572 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Foxc1Q61572 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Foxc1Q61572 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Foxc1Q61572 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Foxc1Q61572 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Foxc1Q61572 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.51■□□□□ 0.23
Foxc1Q61572 Gm11175-201ENSMUST00000116172 543 ntBASIC16.51■□□□□ 0.23
Foxc1Q61572 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.51■□□□□ 0.23
Foxc1Q61572 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Foxc1Q61572 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Foxc1Q61572 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Foxc1Q61572 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Foxc1Q61572 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Foxc1Q61572 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Foxc1Q61572 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Foxc1Q61572 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Foxc1Q61572 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Foxc1Q61572 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Foxc1Q61572 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.48■□□□□ 0.23
Foxc1Q61572 Gm4799-201ENSMUST00000095396 657 ntBASIC16.48■□□□□ 0.23
Foxc1Q61572 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Foxc1Q61572 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Foxc1Q61572 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Foxc1Q61572 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Foxc1Q61572 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Foxc1Q61572 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Foxc1Q61572 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Foxc1Q61572 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Foxc1Q61572 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Foxc1Q61572 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.46■□□□□ 0.23
Foxc1Q61572 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Foxc1Q61572 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxc1Q61572 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxc1Q61572 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxc1Q61572 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Foxc1Q61572 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Foxc1Q61572 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Foxc1Q61572 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Foxc1Q61572 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.44■□□□□ 0.22
Foxc1Q61572 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.44■□□□□ 0.22
Foxc1Q61572 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.44■□□□□ 0.22
Foxc1Q61572 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.44■□□□□ 0.22
Foxc1Q61572 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Foxc1Q61572 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Foxc1Q61572 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxc1Q61572 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxc1Q61572 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxc1Q61572 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.43■□□□□ 0.22
Foxc1Q61572 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.43■□□□□ 0.22
Foxc1Q61572 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxc1Q61572 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Foxc1Q61572 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Foxc1Q61572 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxc1Q61572 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Foxc1Q61572 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Foxc1Q61572 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.42■□□□□ 0.22
Foxc1Q61572 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Foxc1Q61572 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Foxc1Q61572 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Foxc1Q61572 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Foxc1Q61572 Mir3960-201ENSMUST00000198213 73 ntBASIC16.42■□□□□ 0.22
Foxc1Q61572 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Foxc1Q61572 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Foxc1Q61572 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms