Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Mdc1Q5PSV9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Mdc1Q5PSV9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Mdc1Q5PSV9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Mdc1Q5PSV9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
Mdc1Q5PSV9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Mdc1Q5PSV9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Mdc1Q5PSV9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Mdc1Q5PSV9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC31.06■■■□□ 2.56
Mdc1Q5PSV9 Gm14523-201ENSMUST00000117260 558 ntBASIC31.06■■■□□ 2.56
Mdc1Q5PSV9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Mdc1Q5PSV9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
Mdc1Q5PSV9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Mdc1Q5PSV9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Mdc1Q5PSV9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Mdc1Q5PSV9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Mdc1Q5PSV9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Mdc1Q5PSV9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Mdc1Q5PSV9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC31.03■■■□□ 2.56
Mdc1Q5PSV9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Mdc1Q5PSV9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
Mdc1Q5PSV9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Mdc1Q5PSV9 Gm22567-201ENSMUST00000175542 342 ntBASIC31.01■■■□□ 2.56
Mdc1Q5PSV9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC31.01■■■□□ 2.56
Mdc1Q5PSV9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Mdc1Q5PSV9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
Mdc1Q5PSV9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Mdc1Q5PSV9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Mdc1Q5PSV9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Mdc1Q5PSV9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Mdc1Q5PSV9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC30.98■■■□□ 2.55
Mdc1Q5PSV9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Mdc1Q5PSV9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC30.96■■■□□ 2.55
Mdc1Q5PSV9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC30.95■■■□□ 2.54
Mdc1Q5PSV9 Terc-201ENSMUST00000082862 423 ntBASIC30.94■■■□□ 2.54
Mdc1Q5PSV9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Mdc1Q5PSV9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
Mdc1Q5PSV9 Amer2-203ENSMUST00000225247 2662 ntBASIC30.93■■■□□ 2.54
Mdc1Q5PSV9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC30.93■■■□□ 2.54
Mdc1Q5PSV9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Mdc1Q5PSV9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC30.92■■■□□ 2.54
Mdc1Q5PSV9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC30.92■■■□□ 2.54
Mdc1Q5PSV9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Mdc1Q5PSV9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Mdc1Q5PSV9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Mdc1Q5PSV9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Mdc1Q5PSV9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Mdc1Q5PSV9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Mdc1Q5PSV9 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.9■■■□□ 2.54
Mdc1Q5PSV9 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.9■■■□□ 2.54
Mdc1Q5PSV9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC30.89■■■□□ 2.54
Mdc1Q5PSV9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Mdc1Q5PSV9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
Mdc1Q5PSV9 Gm5812-201ENSMUST00000061073 957 ntBASIC30.87■■■□□ 2.53
Mdc1Q5PSV9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Mdc1Q5PSV9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Mdc1Q5PSV9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Mdc1Q5PSV9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Mdc1Q5PSV9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Mdc1Q5PSV9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Mdc1Q5PSV9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Mdc1Q5PSV9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Mdc1Q5PSV9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.85■■■□□ 2.53
Mdc1Q5PSV9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Mdc1Q5PSV9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Mdc1Q5PSV9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
Mdc1Q5PSV9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Mdc1Q5PSV9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Mdc1Q5PSV9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
Mdc1Q5PSV9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Mdc1Q5PSV9 Gm4419-202ENSMUST00000226239 1431 ntBASIC30.82■■■□□ 2.52
Mdc1Q5PSV9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC30.81■■■□□ 2.52
Mdc1Q5PSV9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Mdc1Q5PSV9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
Mdc1Q5PSV9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30.81■■■□□ 2.52
Mdc1Q5PSV9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Mdc1Q5PSV9 Gm10420-201ENSMUST00000121713 882 ntBASIC30.8■■■□□ 2.52
Mdc1Q5PSV9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC30.8■■■□□ 2.52
Mdc1Q5PSV9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Mdc1Q5PSV9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Mdc1Q5PSV9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Mdc1Q5PSV9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30.79■■■□□ 2.52
Mdc1Q5PSV9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Mdc1Q5PSV9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Mdc1Q5PSV9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Mdc1Q5PSV9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Mdc1Q5PSV9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Mdc1Q5PSV9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC30.76■■■□□ 2.52
Mdc1Q5PSV9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Mdc1Q5PSV9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.52
Mdc1Q5PSV9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Mdc1Q5PSV9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Mdc1Q5PSV9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Mdc1Q5PSV9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
Mdc1Q5PSV9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Mdc1Q5PSV9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC30.73■■■□□ 2.51
Mdc1Q5PSV9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
Mdc1Q5PSV9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC30.73■■■□□ 2.51
Mdc1Q5PSV9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Mdc1Q5PSV9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30.71■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms