Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Urb1Q571H0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.31■■□□□ 1
Urb1Q571H0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.31■■□□□ 1
Urb1Q571H0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.31■■□□□ 1
Urb1Q571H0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Urb1Q571H0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.31■■□□□ 1
Urb1Q571H0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.3■■□□□ 1
Urb1Q571H0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.3■■□□□ 1
Urb1Q571H0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.3■■□□□ 1
Urb1Q571H0 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.3■■□□□ 1
Urb1Q571H0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.3■■□□□ 1
Urb1Q571H0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Urb1Q571H0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Urb1Q571H0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Urb1Q571H0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Urb1Q571H0 Gm9812-201ENSMUST00000061934 968 ntBASIC21.29■■□□□ 1
Urb1Q571H0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Urb1Q571H0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.29■■□□□ 1
Urb1Q571H0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Urb1Q571H0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.27■■□□□ 1
Urb1Q571H0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Urb1Q571H0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Urb1Q571H0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Urb1Q571H0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Urb1Q571H0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Urb1Q571H0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Urb1Q571H0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Urb1Q571H0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.24■□□□□ 0.99
Urb1Q571H0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Urb1Q571H0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Urb1Q571H0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.23■□□□□ 0.99
Urb1Q571H0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Urb1Q571H0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Urb1Q571H0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Urb1Q571H0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Urb1Q571H0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Urb1Q571H0 Zxda-201ENSMUST00000117281 2621 ntBASIC21.22■□□□□ 0.99
Urb1Q571H0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Urb1Q571H0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Urb1Q571H0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Urb1Q571H0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Urb1Q571H0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.21■□□□□ 0.99
Urb1Q571H0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Urb1Q571H0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.2■□□□□ 0.98
Urb1Q571H0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.2■□□□□ 0.98
Urb1Q571H0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Urb1Q571H0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.2■□□□□ 0.98
Urb1Q571H0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.2■□□□□ 0.98
Urb1Q571H0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Urb1Q571H0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Urb1Q571H0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Urb1Q571H0 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.19■□□□□ 0.98
Urb1Q571H0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Urb1Q571H0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Urb1Q571H0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Urb1Q571H0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Urb1Q571H0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Urb1Q571H0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Urb1Q571H0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Urb1Q571H0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Urb1Q571H0 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.16■□□□□ 0.98
Urb1Q571H0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Urb1Q571H0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Urb1Q571H0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Urb1Q571H0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.15■□□□□ 0.98
Urb1Q571H0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Urb1Q571H0 Terc-201ENSMUST00000082862 423 ntBASIC21.15■□□□□ 0.98
Urb1Q571H0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Urb1Q571H0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Urb1Q571H0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Urb1Q571H0 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.13■□□□□ 0.97
Urb1Q571H0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Urb1Q571H0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Urb1Q571H0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Urb1Q571H0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.12■□□□□ 0.97
Urb1Q571H0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Urb1Q571H0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Urb1Q571H0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.12■□□□□ 0.97
Urb1Q571H0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.11■□□□□ 0.97
Urb1Q571H0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Urb1Q571H0 Gm14117-201ENSMUST00000122417 843 ntBASIC21.11■□□□□ 0.97
Urb1Q571H0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Urb1Q571H0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Urb1Q571H0 Amer2-203ENSMUST00000225247 2662 ntBASIC21.09■□□□□ 0.97
Urb1Q571H0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Urb1Q571H0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Urb1Q571H0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Urb1Q571H0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Urb1Q571H0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Urb1Q571H0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Urb1Q571H0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Urb1Q571H0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Urb1Q571H0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Urb1Q571H0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms