Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Urb1Q571H0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.31■■□□□ 1
Urb1Q571H0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.31■■□□□ 1
Urb1Q571H0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.31■■□□□ 1
Urb1Q571H0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Urb1Q571H0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.31■■□□□ 1
Urb1Q571H0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.3■■□□□ 1
Urb1Q571H0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.3■■□□□ 1
Urb1Q571H0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.3■■□□□ 1
Urb1Q571H0 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.3■■□□□ 1
Urb1Q571H0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.3■■□□□ 1
Urb1Q571H0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Urb1Q571H0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Urb1Q571H0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Urb1Q571H0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Urb1Q571H0 Gm9812-201ENSMUST00000061934 968 ntBASIC21.29■■□□□ 1
Urb1Q571H0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Urb1Q571H0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.29■■□□□ 1
Urb1Q571H0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Urb1Q571H0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.27■■□□□ 1
Urb1Q571H0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Urb1Q571H0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Urb1Q571H0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Urb1Q571H0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Urb1Q571H0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Urb1Q571H0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Urb1Q571H0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Urb1Q571H0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Urb1Q571H0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.24■□□□□ 0.99
Urb1Q571H0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Urb1Q571H0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Urb1Q571H0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.23■□□□□ 0.99
Urb1Q571H0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Urb1Q571H0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Urb1Q571H0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Urb1Q571H0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Urb1Q571H0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Urb1Q571H0 Zxda-201ENSMUST00000117281 2621 ntBASIC21.22■□□□□ 0.99
Urb1Q571H0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Urb1Q571H0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Urb1Q571H0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Urb1Q571H0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Urb1Q571H0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.21■□□□□ 0.99
Urb1Q571H0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Urb1Q571H0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.2■□□□□ 0.98
Urb1Q571H0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.2■□□□□ 0.98
Urb1Q571H0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Urb1Q571H0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.2■□□□□ 0.98
Urb1Q571H0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.2■□□□□ 0.98
Urb1Q571H0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Urb1Q571H0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Urb1Q571H0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Urb1Q571H0 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.19■□□□□ 0.98
Urb1Q571H0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Urb1Q571H0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Urb1Q571H0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Urb1Q571H0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Urb1Q571H0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Urb1Q571H0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Urb1Q571H0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Urb1Q571H0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Urb1Q571H0 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.16■□□□□ 0.98
Urb1Q571H0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Urb1Q571H0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Urb1Q571H0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Urb1Q571H0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.15■□□□□ 0.98
Urb1Q571H0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Urb1Q571H0 Terc-201ENSMUST00000082862 423 ntBASIC21.15■□□□□ 0.98
Urb1Q571H0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Urb1Q571H0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Urb1Q571H0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Urb1Q571H0 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.13■□□□□ 0.97
Urb1Q571H0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Urb1Q571H0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Urb1Q571H0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Urb1Q571H0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.12■□□□□ 0.97
Urb1Q571H0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Urb1Q571H0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Urb1Q571H0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.12■□□□□ 0.97
Urb1Q571H0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.11■□□□□ 0.97
Urb1Q571H0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Urb1Q571H0 Gm14117-201ENSMUST00000122417 843 ntBASIC21.11■□□□□ 0.97
Urb1Q571H0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Urb1Q571H0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Urb1Q571H0 Amer2-203ENSMUST00000225247 2662 ntBASIC21.09■□□□□ 0.97
Urb1Q571H0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Urb1Q571H0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Urb1Q571H0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Urb1Q571H0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Urb1Q571H0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Urb1Q571H0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Urb1Q571H0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Urb1Q571H0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Urb1Q571H0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Urb1Q571H0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms