Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lmo4P61969 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lmo4P61969 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lmo4P61969 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lmo4P61969 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.92■□□□□ 0.62
Lmo4P61969 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.92■□□□□ 0.62
Lmo4P61969 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lmo4P61969 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.92■□□□□ 0.62
Lmo4P61969 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.91■□□□□ 0.62
Lmo4P61969 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lmo4P61969 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lmo4P61969 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lmo4P61969 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lmo4P61969 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lmo4P61969 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.9■□□□□ 0.62
Lmo4P61969 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Lmo4P61969 Gm7332-201ENSMUST00000118351 454 ntBASIC18.9■□□□□ 0.62
Lmo4P61969 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lmo4P61969 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lmo4P61969 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.89■□□□□ 0.61
Lmo4P61969 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lmo4P61969 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lmo4P61969 Terc-201ENSMUST00000082862 423 ntBASIC18.89■□□□□ 0.61
Lmo4P61969 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lmo4P61969 Gm14523-201ENSMUST00000117260 558 ntBASIC18.88■□□□□ 0.61
Lmo4P61969 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.88■□□□□ 0.61
Lmo4P61969 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lmo4P61969 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lmo4P61969 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lmo4P61969 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lmo4P61969 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Lmo4P61969 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Lmo4P61969 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lmo4P61969 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lmo4P61969 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Lmo4P61969 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lmo4P61969 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lmo4P61969 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Lmo4P61969 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.86■□□□□ 0.61
Lmo4P61969 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lmo4P61969 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lmo4P61969 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lmo4P61969 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lmo4P61969 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.85■□□□□ 0.61
Lmo4P61969 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lmo4P61969 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.84■□□□□ 0.61
Lmo4P61969 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.83■□□□□ 0.61
Lmo4P61969 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lmo4P61969 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lmo4P61969 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lmo4P61969 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lmo4P61969 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lmo4P61969 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lmo4P61969 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lmo4P61969 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lmo4P61969 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lmo4P61969 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Lmo4P61969 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmo4P61969 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmo4P61969 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmo4P61969 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.81■□□□□ 0.6
Lmo4P61969 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Lmo4P61969 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lmo4P61969 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.8■□□□□ 0.6
Lmo4P61969 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lmo4P61969 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.8■□□□□ 0.6
Lmo4P61969 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lmo4P61969 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.8■□□□□ 0.6
Lmo4P61969 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lmo4P61969 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.79■□□□□ 0.6
Lmo4P61969 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lmo4P61969 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lmo4P61969 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Lmo4P61969 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Lmo4P61969 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lmo4P61969 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lmo4P61969 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lmo4P61969 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Lmo4P61969 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lmo4P61969 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmo4P61969 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.76■□□□□ 0.59
Lmo4P61969 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmo4P61969 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.76■□□□□ 0.59
Lmo4P61969 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmo4P61969 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmo4P61969 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.76■□□□□ 0.59
Lmo4P61969 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.75■□□□□ 0.59
Lmo4P61969 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.75■□□□□ 0.59
Lmo4P61969 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lmo4P61969 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.75■□□□□ 0.59
Lmo4P61969 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lmo4P61969 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lmo4P61969 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.74■□□□□ 0.59
Lmo4P61969 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lmo4P61969 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.74■□□□□ 0.59
Lmo4P61969 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lmo4P61969 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lmo4P61969 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Lmo4P61969 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lmo4P61969 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms