Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC28.15■■■□□ 2.1
Atp6v1aP50516 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Atp6v1aP50516 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
Atp6v1aP50516 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Atp6v1aP50516 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Atp6v1aP50516 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Atp6v1aP50516 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Atp6v1aP50516 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.13■■■□□ 2.09
Atp6v1aP50516 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Atp6v1aP50516 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.12■■■□□ 2.09
Atp6v1aP50516 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC28.12■■■□□ 2.09
Atp6v1aP50516 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Atp6v1aP50516 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Atp6v1aP50516 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Atp6v1aP50516 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
Atp6v1aP50516 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Atp6v1aP50516 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Atp6v1aP50516 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
Atp6v1aP50516 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Atp6v1aP50516 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC28.09■■■□□ 2.09
Atp6v1aP50516 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC28.09■■■□□ 2.09
Atp6v1aP50516 Gm5812-201ENSMUST00000061073 957 ntBASIC28.09■■■□□ 2.09
Atp6v1aP50516 Terc-201ENSMUST00000082862 423 ntBASIC28.09■■■□□ 2.09
Atp6v1aP50516 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
Atp6v1aP50516 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.08■■■□□ 2.09
Atp6v1aP50516 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Atp6v1aP50516 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Atp6v1aP50516 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Atp6v1aP50516 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.06■■■□□ 2.08
Atp6v1aP50516 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Atp6v1aP50516 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC28.06■■■□□ 2.08
Atp6v1aP50516 Gm5921-201ENSMUST00000075898 882 ntBASIC28.06■■■□□ 2.08
Atp6v1aP50516 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Atp6v1aP50516 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC28.05■■■□□ 2.08
Atp6v1aP50516 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Atp6v1aP50516 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Atp6v1aP50516 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Atp6v1aP50516 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Atp6v1aP50516 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.02■■■□□ 2.08
Atp6v1aP50516 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Atp6v1aP50516 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Atp6v1aP50516 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Atp6v1aP50516 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
Atp6v1aP50516 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC28■■■□□ 2.07
Atp6v1aP50516 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.99■■■□□ 2.07
Atp6v1aP50516 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Atp6v1aP50516 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Atp6v1aP50516 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Atp6v1aP50516 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Atp6v1aP50516 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.98■■■□□ 2.07
Atp6v1aP50516 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Atp6v1aP50516 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Atp6v1aP50516 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
Atp6v1aP50516 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Atp6v1aP50516 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
Atp6v1aP50516 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Atp6v1aP50516 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Atp6v1aP50516 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Atp6v1aP50516 Gm22567-201ENSMUST00000175542 342 ntBASIC27.95■■■□□ 2.06
Atp6v1aP50516 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Atp6v1aP50516 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC27.94■■■□□ 2.06
Atp6v1aP50516 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.94■■■□□ 2.06
Atp6v1aP50516 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.94■■■□□ 2.06
Atp6v1aP50516 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Atp6v1aP50516 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC27.93■■■□□ 2.06
Atp6v1aP50516 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Atp6v1aP50516 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Atp6v1aP50516 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Atp6v1aP50516 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Atp6v1aP50516 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Atp6v1aP50516 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC27.91■■■□□ 2.06
Atp6v1aP50516 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Atp6v1aP50516 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Atp6v1aP50516 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Atp6v1aP50516 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Atp6v1aP50516 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.89■■■□□ 2.06
Atp6v1aP50516 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Atp6v1aP50516 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Atp6v1aP50516 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.88■■■□□ 2.05
Atp6v1aP50516 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.87■■■□□ 2.05
Atp6v1aP50516 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Atp6v1aP50516 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Atp6v1aP50516 Gm15546-201ENSMUST00000122095 826 ntBASIC27.86■■■□□ 2.05
Atp6v1aP50516 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Atp6v1aP50516 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Atp6v1aP50516 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
Atp6v1aP50516 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Atp6v1aP50516 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.84■■■□□ 2.05
Atp6v1aP50516 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Atp6v1aP50516 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Atp6v1aP50516 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.83■■■□□ 2.05
Atp6v1aP50516 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Atp6v1aP50516 Gm44428-201ENSMUST00000204474 874 ntBASIC27.81■■■□□ 2.04
Atp6v1aP50516 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Atp6v1aP50516 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Atp6v1aP50516 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Atp6v1aP50516 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.79■■■□□ 2.04
Atp6v1aP50516 Gm15039-201ENSMUST00000118914 875 ntBASIC27.79■■■□□ 2.04
Atp6v1aP50516 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Atp6v1aP50516 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms