Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Mmp9P41245 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp9P41245 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp9P41245 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp9P41245 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Mmp9P41245 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Mmp9P41245 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp9P41245 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Mmp9P41245 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mmp9P41245 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.14■□□□□ 0.65
Mmp9P41245 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.14■□□□□ 0.65
Mmp9P41245 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp9P41245 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp9P41245 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.13■□□□□ 0.65
Mmp9P41245 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp9P41245 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp9P41245 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.12■□□□□ 0.65
Mmp9P41245 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp9P41245 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.12■□□□□ 0.65
Mmp9P41245 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp9P41245 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp9P41245 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp9P41245 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp9P41245 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.11■□□□□ 0.65
Mmp9P41245 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp9P41245 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp9P41245 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp9P41245 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Mmp9P41245 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp9P41245 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp9P41245 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp9P41245 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp9P41245 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp9P41245 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp9P41245 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp9P41245 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp9P41245 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Mmp9P41245 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp9P41245 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Mmp9P41245 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Mmp9P41245 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp9P41245 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp9P41245 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp9P41245 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Mmp9P41245 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp9P41245 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp9P41245 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp9P41245 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp9P41245 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Mmp9P41245 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp9P41245 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.05■□□□□ 0.64
Mmp9P41245 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Mmp9P41245 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Mmp9P41245 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp9P41245 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp9P41245 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp9P41245 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp9P41245 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp9P41245 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp9P41245 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp9P41245 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.03■□□□□ 0.64
Mmp9P41245 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp9P41245 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Mmp9P41245 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Mmp9P41245 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp9P41245 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp9P41245 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Mmp9P41245 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Mmp9P41245 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp9P41245 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp9P41245 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp9P41245 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Mmp9P41245 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp9P41245 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp9P41245 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp9P41245 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp9P41245 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp9P41245 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp9P41245 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp9P41245 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp9P41245 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19■□□□□ 0.63
Mmp9P41245 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19■□□□□ 0.63
Mmp9P41245 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp9P41245 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp9P41245 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp9P41245 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp9P41245 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp9P41245 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp9P41245 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp9P41245 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp9P41245 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp9P41245 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp9P41245 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.98■□□□□ 0.63
Mmp9P41245 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp9P41245 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Mmp9P41245 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp9P41245 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp9P41245 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.97■□□□□ 0.63
Mmp9P41245 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp9P41245 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms