Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox6P40645 Gm8503-201ENSMUST00000118131 455 ntBASIC21.33■■□□□ 1.01
Sox6P40645 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sox6P40645 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sox6P40645 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.32■■□□□ 1
Sox6P40645 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Sox6P40645 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sox6P40645 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sox6P40645 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox6P40645 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Sox6P40645 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox6P40645 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Sox6P40645 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.32■■□□□ 1
Sox6P40645 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox6P40645 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox6P40645 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sox6P40645 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox6P40645 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Sox6P40645 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Sox6P40645 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox6P40645 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox6P40645 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox6P40645 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sox6P40645 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox6P40645 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sox6P40645 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox6P40645 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sox6P40645 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Sox6P40645 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sox6P40645 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sox6P40645 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Sox6P40645 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox6P40645 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Sox6P40645 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Sox6P40645 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox6P40645 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox6P40645 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.28■■□□□ 1
Sox6P40645 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox6P40645 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Sox6P40645 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Sox6P40645 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.27■■□□□ 1
Sox6P40645 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.27■■□□□ 1
Sox6P40645 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.27■■□□□ 1
Sox6P40645 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sox6P40645 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox6P40645 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.26■□□□□ 0.99
Sox6P40645 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sox6P40645 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Sox6P40645 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.25■□□□□ 0.99
Sox6P40645 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Sox6P40645 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sox6P40645 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox6P40645 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.24■□□□□ 0.99
Sox6P40645 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.24■□□□□ 0.99
Sox6P40645 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.24■□□□□ 0.99
Sox6P40645 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox6P40645 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox6P40645 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox6P40645 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox6P40645 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox6P40645 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Sox6P40645 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sox6P40645 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox6P40645 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sox6P40645 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sox6P40645 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sox6P40645 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sox6P40645 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox6P40645 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Sox6P40645 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Sox6P40645 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Sox6P40645 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox6P40645 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.21■□□□□ 0.99
Sox6P40645 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox6P40645 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.21■□□□□ 0.99
Sox6P40645 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sox6P40645 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sox6P40645 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox6P40645 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sox6P40645 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox6P40645 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.19■□□□□ 0.98
Sox6P40645 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox6P40645 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
Sox6P40645 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox6P40645 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox6P40645 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox6P40645 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox6P40645 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.18■□□□□ 0.98
Sox6P40645 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Sox6P40645 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sox6P40645 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sox6P40645 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox6P40645 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox6P40645 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Sox6P40645 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox6P40645 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sox6P40645 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox6P40645 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox6P40645 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sox6P40645 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms