Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxa1P35582 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxa1P35582 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Foxa1P35582 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Foxa1P35582 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.26■□□□□ 0.99
Foxa1P35582 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.26■□□□□ 0.99
Foxa1P35582 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxa1P35582 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Foxa1P35582 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.25■□□□□ 0.99
Foxa1P35582 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxa1P35582 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Foxa1P35582 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxa1P35582 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.23■□□□□ 0.99
Foxa1P35582 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Foxa1P35582 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Foxa1P35582 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.23■□□□□ 0.99
Foxa1P35582 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.23■□□□□ 0.99
Foxa1P35582 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.22■□□□□ 0.99
Foxa1P35582 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxa1P35582 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Foxa1P35582 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Foxa1P35582 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxa1P35582 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Foxa1P35582 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Foxa1P35582 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxa1P35582 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxa1P35582 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxa1P35582 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.21■□□□□ 0.99
Foxa1P35582 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Foxa1P35582 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxa1P35582 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxa1P35582 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxa1P35582 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxa1P35582 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxa1P35582 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Foxa1P35582 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Foxa1P35582 Mir3960-201ENSMUST00000198213 73 ntBASIC21.19■□□□□ 0.98
Foxa1P35582 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxa1P35582 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxa1P35582 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxa1P35582 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxa1P35582 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.17■□□□□ 0.98
Foxa1P35582 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxa1P35582 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxa1P35582 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Foxa1P35582 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Foxa1P35582 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Foxa1P35582 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxa1P35582 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.16■□□□□ 0.98
Foxa1P35582 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.16■□□□□ 0.98
Foxa1P35582 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.16■□□□□ 0.98
Foxa1P35582 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxa1P35582 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Foxa1P35582 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.15■□□□□ 0.98
Foxa1P35582 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.14■□□□□ 0.97
Foxa1P35582 Gm45364-201ENSMUST00000210883 159 ntBASIC21.14■□□□□ 0.97
Foxa1P35582 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Foxa1P35582 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Foxa1P35582 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Foxa1P35582 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Foxa1P35582 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxa1P35582 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxa1P35582 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Foxa1P35582 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.12■□□□□ 0.97
Foxa1P35582 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxa1P35582 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxa1P35582 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxa1P35582 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxa1P35582 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxa1P35582 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxa1P35582 Gm6311-201ENSMUST00000073790 878 ntBASIC21.12■□□□□ 0.97
Foxa1P35582 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Foxa1P35582 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxa1P35582 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.11■□□□□ 0.97
Foxa1P35582 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxa1P35582 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxa1P35582 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Foxa1P35582 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.1■□□□□ 0.97
Foxa1P35582 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxa1P35582 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Foxa1P35582 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxa1P35582 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxa1P35582 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxa1P35582 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Foxa1P35582 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.09■□□□□ 0.97
Foxa1P35582 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Foxa1P35582 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Foxa1P35582 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.08■□□□□ 0.97
Foxa1P35582 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.08■□□□□ 0.96
Foxa1P35582 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Foxa1P35582 Gm9812-201ENSMUST00000061934 968 ntBASIC21.07■□□□□ 0.96
Foxa1P35582 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Foxa1P35582 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Foxa1P35582 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Foxa1P35582 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.06■□□□□ 0.96
Foxa1P35582 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Foxa1P35582 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.05■□□□□ 0.96
Foxa1P35582 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.05■□□□□ 0.96
Foxa1P35582 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Foxa1P35582 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms