Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RetP35546 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RetP35546 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RetP35546 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RetP35546 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RetP35546 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RetP35546 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RetP35546 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RetP35546 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.42■■□□□ 1.02
RetP35546 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RetP35546 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RetP35546 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RetP35546 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.41■■□□□ 1.02
RetP35546 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RetP35546 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RetP35546 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RetP35546 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RetP35546 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RetP35546 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RetP35546 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RetP35546 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RetP35546 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RetP35546 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RetP35546 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RetP35546 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RetP35546 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
RetP35546 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RetP35546 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RetP35546 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RetP35546 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RetP35546 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RetP35546 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.36■■□□□ 1.01
RetP35546 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.36■■□□□ 1.01
RetP35546 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RetP35546 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RetP35546 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RetP35546 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RetP35546 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RetP35546 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.34■■□□□ 1.01
RetP35546 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RetP35546 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RetP35546 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RetP35546 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.33■■□□□ 1
RetP35546 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RetP35546 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RetP35546 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RetP35546 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RetP35546 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
RetP35546 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RetP35546 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RetP35546 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.31■■□□□ 1
RetP35546 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.31■■□□□ 1
RetP35546 Scarna2-201ENSMUST00000157560 414 ntBASIC21.31■■□□□ 1
RetP35546 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.31■■□□□ 1
RetP35546 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RetP35546 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
RetP35546 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RetP35546 Gm11687-201ENSMUST00000118911 886 ntBASIC21.3■■□□□ 1
RetP35546 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RetP35546 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.29■■□□□ 1
RetP35546 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RetP35546 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RetP35546 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RetP35546 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RetP35546 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.28■■□□□ 1
RetP35546 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RetP35546 Gm9806-201ENSMUST00000051080 552 ntBASIC21.27■■□□□ 1
RetP35546 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.27■■□□□ 1
RetP35546 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RetP35546 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RetP35546 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RetP35546 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RetP35546 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RetP35546 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.26■□□□□ 0.99
RetP35546 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RetP35546 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RetP35546 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RetP35546 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.25■□□□□ 0.99
RetP35546 Gm12366-201ENSMUST00000121722 873 ntBASIC21.25■□□□□ 0.99
RetP35546 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.25■□□□□ 0.99
RetP35546 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RetP35546 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RetP35546 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RetP35546 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.25■□□□□ 0.99
RetP35546 Gm5786-201ENSMUST00000085368 882 ntBASIC21.25■□□□□ 0.99
RetP35546 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RetP35546 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RetP35546 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RetP35546 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RetP35546 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RetP35546 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RetP35546 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RetP35546 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.23■□□□□ 0.99
RetP35546 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RetP35546 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RetP35546 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RetP35546 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RetP35546 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RetP35546 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RetP35546 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms