Protein–RNA interactions for Protein: P29351

Ptpn6, Tyrosine-protein phosphatase non-receptor type 6, mousemouse

Known RBP Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn6P29351 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ptpn6P29351 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptpn6P29351 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.78■■□□□ 1.08
Ptpn6P29351 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.78■■□□□ 1.08
Ptpn6P29351 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptpn6P29351 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ptpn6P29351 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ptpn6P29351 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptpn6P29351 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ptpn6P29351 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptpn6P29351 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptpn6P29351 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptpn6P29351 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptpn6P29351 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptpn6P29351 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptpn6P29351 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptpn6P29351 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptpn6P29351 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptpn6P29351 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptpn6P29351 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ptpn6P29351 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn6P29351 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ptpn6P29351 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn6P29351 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn6P29351 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn6P29351 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ptpn6P29351 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn6P29351 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn6P29351 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ptpn6P29351 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ptpn6P29351 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptpn6P29351 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptpn6P29351 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptpn6P29351 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.7■■□□□ 1.06
Ptpn6P29351 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptpn6P29351 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ptpn6P29351 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptpn6P29351 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ptpn6P29351 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.7■■□□□ 1.06
Ptpn6P29351 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptpn6P29351 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptpn6P29351 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ptpn6P29351 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.69■■□□□ 1.06
Ptpn6P29351 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptpn6P29351 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ptpn6P29351 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ptpn6P29351 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ptpn6P29351 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptpn6P29351 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptpn6P29351 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ptpn6P29351 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptpn6P29351 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptpn6P29351 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.64■■□□□ 1.06
Ptpn6P29351 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptpn6P29351 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ptpn6P29351 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.64■■□□□ 1.05
Ptpn6P29351 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.64■■□□□ 1.05
Ptpn6P29351 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ptpn6P29351 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptpn6P29351 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptpn6P29351 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.63■■□□□ 1.05
Ptpn6P29351 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ptpn6P29351 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ptpn6P29351 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ptpn6P29351 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptpn6P29351 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptpn6P29351 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptpn6P29351 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.62■■□□□ 1.05
Ptpn6P29351 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.62■■□□□ 1.05
Ptpn6P29351 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.62■■□□□ 1.05
Ptpn6P29351 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ptpn6P29351 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptpn6P29351 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptpn6P29351 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ptpn6P29351 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptpn6P29351 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ptpn6P29351 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptpn6P29351 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptpn6P29351 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.6■■□□□ 1.05
Ptpn6P29351 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ptpn6P29351 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptpn6P29351 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptpn6P29351 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptpn6P29351 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptpn6P29351 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.59■■□□□ 1.05
Ptpn6P29351 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ptpn6P29351 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptpn6P29351 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptpn6P29351 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptpn6P29351 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.58■■□□□ 1.04
Ptpn6P29351 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptpn6P29351 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptpn6P29351 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptpn6P29351 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptpn6P29351 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptpn6P29351 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptpn6P29351 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptpn6P29351 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptpn6P29351 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.55■■□□□ 1.04
Ptpn6P29351 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms