Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
P20040 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P20040 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P20040 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
P20040 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
P20040 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
P20040 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
P20040 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
P20040 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
P20040 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.21■□□□□ 0.83
P20040 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
P20040 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.2■□□□□ 0.82
P20040 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.2■□□□□ 0.82
P20040 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
P20040 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.2■□□□□ 0.82
P20040 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P20040 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.19■□□□□ 0.82
P20040 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
P20040 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P20040 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.19■□□□□ 0.82
P20040 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P20040 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P20040 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.18■□□□□ 0.82
P20040 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.18■□□□□ 0.82
P20040 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
P20040 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P20040 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
P20040 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P20040 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
P20040 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
P20040 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P20040 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
P20040 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
P20040 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P20040 Gm7432-201ENSMUST00000210343 879 ntBASIC20.15■□□□□ 0.82
P20040 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
P20040 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
P20040 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
P20040 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P20040 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
P20040 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P20040 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
P20040 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P20040 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
P20040 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P20040 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
P20040 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
P20040 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P20040 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P20040 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.11■□□□□ 0.81
P20040 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P20040 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
P20040 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P20040 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P20040 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P20040 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P20040 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.1■□□□□ 0.81
P20040 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P20040 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
P20040 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P20040 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P20040 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P20040 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P20040 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P20040 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
P20040 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
P20040 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P20040 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P20040 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P20040 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P20040 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
P20040 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P20040 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P20040 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P20040 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
P20040 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P20040 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P20040 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.06■□□□□ 0.8
P20040 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P20040 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P20040 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
P20040 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
P20040 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.05■□□□□ 0.8
P20040 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.05■□□□□ 0.8
P20040 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P20040 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
P20040 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P20040 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P20040 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P20040 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
P20040 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P20040 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P20040 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
P20040 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
P20040 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
P20040 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P20040 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P20040 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.03■□□□□ 0.8
P20040 Gm11599-201ENSMUST00000118720 878 ntBASIC20.03■□□□□ 0.8
P20040 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms