Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P06320 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
P06320 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
P06320 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P06320 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
P06320 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P06320 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
P06320 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P06320 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
P06320 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P06320 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
P06320 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC14.46□□□□□ -0.09
P06320 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
P06320 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06320 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06320 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06320 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
P06320 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P06320 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC14.45□□□□□ -0.1
P06320 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC14.45□□□□□ -0.1
P06320 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06320 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P06320 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
P06320 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06320 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06320 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC14.44□□□□□ -0.1
P06320 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06320 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06320 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P06320 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06320 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
P06320 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
P06320 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06320 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P06320 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P06320 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06320 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06320 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
P06320 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
P06320 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06320 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06320 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
P06320 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06320 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P06320 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06320 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
P06320 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06320 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06320 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06320 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06320 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
P06320 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P06320 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
P06320 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06320 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06320 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC14.39□□□□□ -0.11
P06320 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P06320 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P06320 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06320 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
P06320 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P06320 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
P06320 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06320 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P06320 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06320 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
P06320 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06320 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P06320 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06320 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06320 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06320 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06320 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
P06320 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P06320 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
P06320 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06320 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
P06320 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P06320 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06320 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC14.37□□□□□ -0.11
P06320 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06320 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06320 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P06320 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
P06320 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P06320 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06320 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
P06320 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
P06320 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06320 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06320 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06320 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06320 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06320 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P06320 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06320 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06320 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06320 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06320 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06320 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms