Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cd74P04441 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cd74P04441 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cd74P04441 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd74P04441 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd74P04441 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd74P04441 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cd74P04441 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.04■□□□□ 0.64
Cd74P04441 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd74P04441 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.04■□□□□ 0.64
Cd74P04441 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cd74P04441 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd74P04441 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.04■□□□□ 0.64
Cd74P04441 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cd74P04441 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd74P04441 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd74P04441 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd74P04441 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd74P04441 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cd74P04441 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.03■□□□□ 0.64
Cd74P04441 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Cd74P04441 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd74P04441 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd74P04441 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd74P04441 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.01■□□□□ 0.63
Cd74P04441 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd74P04441 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd74P04441 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd74P04441 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cd74P04441 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd74P04441 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cd74P04441 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd74P04441 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd74P04441 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd74P04441 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cd74P04441 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd74P04441 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd74P04441 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd74P04441 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd74P04441 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd74P04441 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd74P04441 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cd74P04441 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cd74P04441 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd74P04441 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Cd74P04441 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.97■□□□□ 0.63
Cd74P04441 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd74P04441 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.96■□□□□ 0.63
Cd74P04441 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd74P04441 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd74P04441 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cd74P04441 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd74P04441 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.96■□□□□ 0.63
Cd74P04441 Gm6311-201ENSMUST00000073790 878 ntBASIC18.96■□□□□ 0.63
Cd74P04441 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd74P04441 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.95■□□□□ 0.62
Cd74P04441 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd74P04441 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Cd74P04441 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd74P04441 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd74P04441 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.95■□□□□ 0.62
Cd74P04441 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd74P04441 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd74P04441 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd74P04441 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cd74P04441 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cd74P04441 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Cd74P04441 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd74P04441 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cd74P04441 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd74P04441 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Cd74P04441 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd74P04441 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cd74P04441 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cd74P04441 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cd74P04441 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd74P04441 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd74P04441 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cd74P04441 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd74P04441 Mir6538-201ENSMUST00000183713 110 ntBASIC18.92■□□□□ 0.62
Cd74P04441 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.92■□□□□ 0.62
Cd74P04441 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cd74P04441 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd74P04441 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cd74P04441 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cd74P04441 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd74P04441 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.9■□□□□ 0.62
Cd74P04441 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cd74P04441 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd74P04441 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd74P04441 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cd74P04441 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd74P04441 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd74P04441 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd74P04441 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd74P04441 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cd74P04441 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cd74P04441 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Cd74P04441 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cd74P04441 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms