Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tgfb1P04202 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tgfb1P04202 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tgfb1P04202 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tgfb1P04202 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Tgfb1P04202 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Tgfb1P04202 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tgfb1P04202 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tgfb1P04202 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tgfb1P04202 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tgfb1P04202 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tgfb1P04202 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Tgfb1P04202 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.27■■□□□ 1
Tgfb1P04202 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Tgfb1P04202 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tgfb1P04202 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tgfb1P04202 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Tgfb1P04202 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tgfb1P04202 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tgfb1P04202 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Tgfb1P04202 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tgfb1P04202 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tgfb1P04202 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tgfb1P04202 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tgfb1P04202 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tgfb1P04202 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.24■□□□□ 0.99
Tgfb1P04202 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Tgfb1P04202 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tgfb1P04202 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tgfb1P04202 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.23■□□□□ 0.99
Tgfb1P04202 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Tgfb1P04202 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tgfb1P04202 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Tgfb1P04202 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tgfb1P04202 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tgfb1P04202 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tgfb1P04202 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tgfb1P04202 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tgfb1P04202 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tgfb1P04202 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Tgfb1P04202 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tgfb1P04202 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tgfb1P04202 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tgfb1P04202 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tgfb1P04202 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tgfb1P04202 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.19■□□□□ 0.98
Tgfb1P04202 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tgfb1P04202 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tgfb1P04202 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tgfb1P04202 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.18■□□□□ 0.98
Tgfb1P04202 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tgfb1P04202 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tgfb1P04202 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Tgfb1P04202 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tgfb1P04202 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tgfb1P04202 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tgfb1P04202 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.17■□□□□ 0.98
Tgfb1P04202 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.17■□□□□ 0.98
Tgfb1P04202 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tgfb1P04202 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Tgfb1P04202 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tgfb1P04202 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tgfb1P04202 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Tgfb1P04202 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.16■□□□□ 0.98
Tgfb1P04202 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.16■□□□□ 0.98
Tgfb1P04202 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Tgfb1P04202 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tgfb1P04202 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Tgfb1P04202 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Tgfb1P04202 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
Tgfb1P04202 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tgfb1P04202 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tgfb1P04202 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tgfb1P04202 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tgfb1P04202 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tgfb1P04202 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tgfb1P04202 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tgfb1P04202 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tgfb1P04202 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.13■□□□□ 0.97
Tgfb1P04202 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tgfb1P04202 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tgfb1P04202 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tgfb1P04202 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.12■□□□□ 0.97
Tgfb1P04202 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tgfb1P04202 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.12■□□□□ 0.97
Tgfb1P04202 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tgfb1P04202 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Tgfb1P04202 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tgfb1P04202 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tgfb1P04202 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tgfb1P04202 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tgfb1P04202 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tgfb1P04202 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.1■□□□□ 0.97
Tgfb1P04202 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Tgfb1P04202 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tgfb1P04202 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tgfb1P04202 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tgfb1P04202 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tgfb1P04202 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tgfb1P04202 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms