Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
P01739 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P01739 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
P01739 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01739 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P01739 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.2■□□□□ 0.34
P01739 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.2■□□□□ 0.34
P01739 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01739 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01739 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01739 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01739 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.19■□□□□ 0.34
P01739 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01739 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01739 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01739 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01739 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.18■□□□□ 0.34
P01739 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01739 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01739 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01739 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01739 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01739 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01739 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01739 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01739 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01739 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01739 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01739 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
P01739 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01739 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
P01739 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01739 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.15■□□□□ 0.34
P01739 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P01739 Gm37136-201ENSMUST00000194368 194 ntBASIC17.14■□□□□ 0.33
P01739 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
P01739 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01739 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
P01739 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01739 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01739 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01739 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01739 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01739 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01739 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
P01739 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01739 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01739 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01739 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01739 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01739 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01739 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.1■□□□□ 0.33
P01739 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01739 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01739 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P01739 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.09■□□□□ 0.33
P01739 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01739 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01739 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P01739 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01739 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01739 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
P01739 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
P01739 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01739 Gm8503-201ENSMUST00000118131 455 ntBASIC17.08■□□□□ 0.32
P01739 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01739 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.07■□□□□ 0.32
P01739 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01739 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01739 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01739 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01739 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01739 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01739 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01739 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01739 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
P01739 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.06■□□□□ 0.32
P01739 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01739 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01739 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01739 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.06■□□□□ 0.32
P01739 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01739 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
P01739 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P01739 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
P01739 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P01739 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01739 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01739 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01739 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01739 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
P01739 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01739 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01739 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01739 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01739 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01739 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01739 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01739 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.03■□□□□ 0.32
P01739 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms