Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NgfP01139 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NgfP01139 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.76■□□□□ 0.91
NgfP01139 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.76■□□□□ 0.91
NgfP01139 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.76■□□□□ 0.91
NgfP01139 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NgfP01139 Terc-201ENSMUST00000082862 423 ntBASIC20.75■□□□□ 0.91
NgfP01139 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NgfP01139 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NgfP01139 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NgfP01139 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NgfP01139 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NgfP01139 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NgfP01139 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.73■□□□□ 0.91
NgfP01139 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NgfP01139 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NgfP01139 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.72■□□□□ 0.91
NgfP01139 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NgfP01139 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NgfP01139 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NgfP01139 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.71■□□□□ 0.91
NgfP01139 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NgfP01139 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NgfP01139 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NgfP01139 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NgfP01139 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NgfP01139 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NgfP01139 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NgfP01139 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NgfP01139 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NgfP01139 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NgfP01139 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NgfP01139 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NgfP01139 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NgfP01139 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NgfP01139 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.67■□□□□ 0.9
NgfP01139 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.67■□□□□ 0.9
NgfP01139 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NgfP01139 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NgfP01139 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NgfP01139 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NgfP01139 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.66■□□□□ 0.9
NgfP01139 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.66■□□□□ 0.9
NgfP01139 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NgfP01139 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.66■□□□□ 0.9
NgfP01139 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
NgfP01139 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NgfP01139 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.65■□□□□ 0.9
NgfP01139 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NgfP01139 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NgfP01139 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.64■□□□□ 0.89
NgfP01139 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.64■□□□□ 0.89
NgfP01139 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NgfP01139 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NgfP01139 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.63■□□□□ 0.89
NgfP01139 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NgfP01139 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NgfP01139 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NgfP01139 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.62■□□□□ 0.89
NgfP01139 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.62■□□□□ 0.89
NgfP01139 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NgfP01139 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NgfP01139 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NgfP01139 Gm10420-201ENSMUST00000121713 882 ntBASIC20.6■□□□□ 0.89
NgfP01139 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NgfP01139 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.6■□□□□ 0.89
NgfP01139 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NgfP01139 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NgfP01139 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NgfP01139 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NgfP01139 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
NgfP01139 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.58■□□□□ 0.88
NgfP01139 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NgfP01139 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NgfP01139 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NgfP01139 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NgfP01139 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NgfP01139 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NgfP01139 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NgfP01139 Amer2-203ENSMUST00000225247 2662 ntBASIC20.57■□□□□ 0.88
NgfP01139 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NgfP01139 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NgfP01139 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NgfP01139 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NgfP01139 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NgfP01139 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NgfP01139 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NgfP01139 Gm44428-201ENSMUST00000204474 874 ntBASIC20.54■□□□□ 0.88
NgfP01139 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NgfP01139 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NgfP01139 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.53■□□□□ 0.88
NgfP01139 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NgfP01139 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NgfP01139 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NgfP01139 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NgfP01139 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.53■□□□□ 0.88
NgfP01139 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NgfP01139 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.52■□□□□ 0.88
NgfP01139 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.51■□□□□ 0.87
NgfP01139 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms