Protein–RNA interactions for Protein: O54774

Ap3d1, AP-3 complex subunit delta-1, mousemouse

Predictions only

Length 1,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3d1O54774 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.43■■□□□ 1.34
Ap3d1O54774 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ap3d1O54774 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ap3d1O54774 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.42■■□□□ 1.34
Ap3d1O54774 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Ap3d1O54774 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ap3d1O54774 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Ap3d1O54774 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ap3d1O54774 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ap3d1O54774 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Ap3d1O54774 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Ap3d1O54774 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.4■■□□□ 1.34
Ap3d1O54774 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ap3d1O54774 Gm45364-201ENSMUST00000210883 159 ntBASIC23.39■■□□□ 1.33
Ap3d1O54774 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.39■■□□□ 1.33
Ap3d1O54774 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ap3d1O54774 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ap3d1O54774 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ap3d1O54774 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ap3d1O54774 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ap3d1O54774 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ap3d1O54774 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ap3d1O54774 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ap3d1O54774 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ap3d1O54774 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.37■■□□□ 1.33
Ap3d1O54774 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.37■■□□□ 1.33
Ap3d1O54774 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ap3d1O54774 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ap3d1O54774 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ap3d1O54774 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.35■■□□□ 1.33
Ap3d1O54774 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ap3d1O54774 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ap3d1O54774 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
Ap3d1O54774 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.34■■□□□ 1.33
Ap3d1O54774 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Ap3d1O54774 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ap3d1O54774 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ap3d1O54774 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.33■■□□□ 1.33
Ap3d1O54774 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ap3d1O54774 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Ap3d1O54774 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ap3d1O54774 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Ap3d1O54774 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.31■■□□□ 1.32
Ap3d1O54774 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Ap3d1O54774 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ap3d1O54774 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Ap3d1O54774 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ap3d1O54774 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.31■■□□□ 1.32
Ap3d1O54774 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ap3d1O54774 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ap3d1O54774 Gm9812-201ENSMUST00000061934 968 ntBASIC23.3■■□□□ 1.32
Ap3d1O54774 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ap3d1O54774 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ap3d1O54774 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ap3d1O54774 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ap3d1O54774 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ap3d1O54774 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ap3d1O54774 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.28■■□□□ 1.32
Ap3d1O54774 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.28■■□□□ 1.32
Ap3d1O54774 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ap3d1O54774 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ap3d1O54774 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ap3d1O54774 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ap3d1O54774 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ap3d1O54774 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ap3d1O54774 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.26■■□□□ 1.31
Ap3d1O54774 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Ap3d1O54774 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ap3d1O54774 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ap3d1O54774 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ap3d1O54774 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ap3d1O54774 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
Ap3d1O54774 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.25■■□□□ 1.31
Ap3d1O54774 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ap3d1O54774 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ap3d1O54774 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ap3d1O54774 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ap3d1O54774 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.25■■□□□ 1.31
Ap3d1O54774 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ap3d1O54774 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.24■■□□□ 1.31
Ap3d1O54774 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ap3d1O54774 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ap3d1O54774 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.23■■□□□ 1.31
Ap3d1O54774 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ap3d1O54774 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ap3d1O54774 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ap3d1O54774 Scarna2-201ENSMUST00000157560 414 ntBASIC23.21■■□□□ 1.31
Ap3d1O54774 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.21■■□□□ 1.31
Ap3d1O54774 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ap3d1O54774 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ap3d1O54774 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Ap3d1O54774 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ap3d1O54774 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ap3d1O54774 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ap3d1O54774 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
Ap3d1O54774 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Ap3d1O54774 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ap3d1O54774 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Ap3d1O54774 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ap3d1O54774 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 303.9 ms