Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Hps1O08983 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hps1O08983 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hps1O08983 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hps1O08983 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hps1O08983 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hps1O08983 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hps1O08983 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hps1O08983 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hps1O08983 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hps1O08983 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.94■□□□□ 0.94
Hps1O08983 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.94■□□□□ 0.94
Hps1O08983 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hps1O08983 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hps1O08983 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hps1O08983 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hps1O08983 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hps1O08983 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hps1O08983 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hps1O08983 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.92■□□□□ 0.94
Hps1O08983 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hps1O08983 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hps1O08983 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hps1O08983 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hps1O08983 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hps1O08983 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hps1O08983 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hps1O08983 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.91■□□□□ 0.94
Hps1O08983 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hps1O08983 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps1O08983 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.9■□□□□ 0.94
Hps1O08983 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hps1O08983 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Hps1O08983 Gm11599-201ENSMUST00000118720 878 ntBASIC20.89■□□□□ 0.93
Hps1O08983 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hps1O08983 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hps1O08983 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hps1O08983 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hps1O08983 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hps1O08983 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hps1O08983 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hps1O08983 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hps1O08983 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Hps1O08983 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Hps1O08983 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hps1O08983 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hps1O08983 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hps1O08983 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps1O08983 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps1O08983 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps1O08983 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps1O08983 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps1O08983 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps1O08983 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps1O08983 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps1O08983 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Hps1O08983 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps1O08983 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hps1O08983 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.84■□□□□ 0.93
Hps1O08983 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hps1O08983 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hps1O08983 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.83■□□□□ 0.93
Hps1O08983 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Hps1O08983 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.83■□□□□ 0.93
Hps1O08983 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Hps1O08983 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hps1O08983 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Hps1O08983 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hps1O08983 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Hps1O08983 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hps1O08983 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Hps1O08983 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hps1O08983 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.82■□□□□ 0.92
Hps1O08983 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hps1O08983 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hps1O08983 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Hps1O08983 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hps1O08983 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps1O08983 Mir6538-201ENSMUST00000183713 110 ntBASIC20.81■□□□□ 0.92
Hps1O08983 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps1O08983 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps1O08983 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.81■□□□□ 0.92
Hps1O08983 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps1O08983 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hps1O08983 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hps1O08983 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.8■□□□□ 0.92
Hps1O08983 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.8■□□□□ 0.92
Hps1O08983 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hps1O08983 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hps1O08983 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hps1O08983 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hps1O08983 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hps1O08983 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hps1O08983 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hps1O08983 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hps1O08983 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hps1O08983 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hps1O08983 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Hps1O08983 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hps1O08983 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms