Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Raet1cO08604 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1cO08604 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1cO08604 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.46■□□□□ 0.87
Raet1cO08604 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Raet1cO08604 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1cO08604 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1cO08604 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1cO08604 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Raet1cO08604 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1cO08604 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1cO08604 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1cO08604 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1cO08604 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1cO08604 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Raet1cO08604 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Raet1cO08604 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.44■□□□□ 0.86
Raet1cO08604 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
Raet1cO08604 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.43■□□□□ 0.86
Raet1cO08604 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Raet1cO08604 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Raet1cO08604 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.42■□□□□ 0.86
Raet1cO08604 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Raet1cO08604 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Raet1cO08604 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.42■□□□□ 0.86
Raet1cO08604 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Raet1cO08604 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Raet1cO08604 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Raet1cO08604 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Raet1cO08604 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Raet1cO08604 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Raet1cO08604 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Raet1cO08604 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Raet1cO08604 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Raet1cO08604 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Raet1cO08604 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Raet1cO08604 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Raet1cO08604 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raet1cO08604 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raet1cO08604 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raet1cO08604 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raet1cO08604 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raet1cO08604 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raet1cO08604 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raet1cO08604 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.37■□□□□ 0.85
Raet1cO08604 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1cO08604 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1cO08604 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.36■□□□□ 0.85
Raet1cO08604 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1cO08604 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Raet1cO08604 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1cO08604 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1cO08604 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1cO08604 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1cO08604 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1cO08604 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1cO08604 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Raet1cO08604 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1cO08604 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.34■□□□□ 0.85
Raet1cO08604 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Raet1cO08604 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Raet1cO08604 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Raet1cO08604 Gm7432-201ENSMUST00000210343 879 ntBASIC20.33■□□□□ 0.85
Raet1cO08604 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.33■□□□□ 0.84
Raet1cO08604 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Raet1cO08604 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raet1cO08604 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raet1cO08604 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Raet1cO08604 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Raet1cO08604 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1cO08604 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1cO08604 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1cO08604 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1cO08604 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1cO08604 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.31■□□□□ 0.84
Raet1cO08604 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1cO08604 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1cO08604 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1cO08604 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1cO08604 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.3■□□□□ 0.84
Raet1cO08604 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1cO08604 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raet1cO08604 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Raet1cO08604 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raet1cO08604 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.29■□□□□ 0.84
Raet1cO08604 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.29■□□□□ 0.84
Raet1cO08604 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raet1cO08604 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1cO08604 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1cO08604 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Raet1cO08604 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1cO08604 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1cO08604 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1cO08604 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1cO08604 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1cO08604 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Raet1cO08604 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Raet1cO08604 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Raet1cO08604 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1cO08604 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms