Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cldn20G5E8X0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn20G5E8X0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn20G5E8X0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn20G5E8X0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.93■□□□□ 0.78
Cldn20G5E8X0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cldn20G5E8X0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn20G5E8X0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn20G5E8X0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn20G5E8X0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn20G5E8X0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.92■□□□□ 0.78
Cldn20G5E8X0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn20G5E8X0 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.92■□□□□ 0.78
Cldn20G5E8X0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn20G5E8X0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn20G5E8X0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn20G5E8X0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn20G5E8X0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn20G5E8X0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn20G5E8X0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn20G5E8X0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn20G5E8X0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cldn20G5E8X0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn20G5E8X0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn20G5E8X0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.9■□□□□ 0.78
Cldn20G5E8X0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn20G5E8X0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn20G5E8X0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cldn20G5E8X0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn20G5E8X0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cldn20G5E8X0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn20G5E8X0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cldn20G5E8X0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn20G5E8X0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn20G5E8X0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn20G5E8X0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn20G5E8X0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Cldn20G5E8X0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn20G5E8X0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn20G5E8X0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cldn20G5E8X0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn20G5E8X0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn20G5E8X0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.85■□□□□ 0.77
Cldn20G5E8X0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.85■□□□□ 0.77
Cldn20G5E8X0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.85■□□□□ 0.77
Cldn20G5E8X0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn20G5E8X0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn20G5E8X0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn20G5E8X0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.85■□□□□ 0.77
Cldn20G5E8X0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn20G5E8X0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn20G5E8X0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.84■□□□□ 0.77
Cldn20G5E8X0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn20G5E8X0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn20G5E8X0 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.84■□□□□ 0.77
Cldn20G5E8X0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn20G5E8X0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn20G5E8X0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn20G5E8X0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn20G5E8X0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn20G5E8X0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn20G5E8X0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.83■□□□□ 0.76
Cldn20G5E8X0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn20G5E8X0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn20G5E8X0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn20G5E8X0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn20G5E8X0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cldn20G5E8X0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn20G5E8X0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn20G5E8X0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cldn20G5E8X0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn20G5E8X0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn20G5E8X0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn20G5E8X0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn20G5E8X0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn20G5E8X0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn20G5E8X0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.8■□□□□ 0.76
Cldn20G5E8X0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn20G5E8X0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn20G5E8X0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn20G5E8X0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn20G5E8X0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.79■□□□□ 0.76
Cldn20G5E8X0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn20G5E8X0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Cldn20G5E8X0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cldn20G5E8X0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn20G5E8X0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn20G5E8X0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cldn20G5E8X0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn20G5E8X0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn20G5E8X0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn20G5E8X0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn20G5E8X0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn20G5E8X0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.76■□□□□ 0.75
Cldn20G5E8X0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn20G5E8X0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn20G5E8X0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn20G5E8X0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn20G5E8X0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cldn20G5E8X0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms