Protein–RNA interactions for Protein: F2Z478

Gm11238, Predicted gene 11238, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11238F2Z478 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Gm11238F2Z478 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Gm11238F2Z478 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Gm11238F2Z478 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Gm11238F2Z478 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Gm11238F2Z478 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.54■■□□□ 1.52
Gm11238F2Z478 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Gm11238F2Z478 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Gm11238F2Z478 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Gm11238F2Z478 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.52■■□□□ 1.52
Gm11238F2Z478 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.52■■□□□ 1.52
Gm11238F2Z478 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
Gm11238F2Z478 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Gm11238F2Z478 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Gm11238F2Z478 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.5■■□□□ 1.51
Gm11238F2Z478 Terc-201ENSMUST00000082862 423 ntBASIC24.5■■□□□ 1.51
Gm11238F2Z478 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Gm11238F2Z478 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Gm11238F2Z478 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Gm11238F2Z478 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.49■■□□□ 1.51
Gm11238F2Z478 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Gm11238F2Z478 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Gm11238F2Z478 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Gm11238F2Z478 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Gm11238F2Z478 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Gm11238F2Z478 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm11238F2Z478 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Gm11238F2Z478 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.47■■□□□ 1.51
Gm11238F2Z478 Amer2-203ENSMUST00000225247 2662 ntBASIC24.46■■□□□ 1.51
Gm11238F2Z478 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Gm11238F2Z478 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Gm11238F2Z478 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.45■■□□□ 1.5
Gm11238F2Z478 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.45■■□□□ 1.5
Gm11238F2Z478 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm11238F2Z478 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gm11238F2Z478 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gm11238F2Z478 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Gm11238F2Z478 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Gm11238F2Z478 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Gm11238F2Z478 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Gm11238F2Z478 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.44■■□□□ 1.5
Gm11238F2Z478 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.43■■□□□ 1.5
Gm11238F2Z478 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm11238F2Z478 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm11238F2Z478 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm11238F2Z478 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.42■■□□□ 1.5
Gm11238F2Z478 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Gm11238F2Z478 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm11238F2Z478 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.41■■□□□ 1.5
Gm11238F2Z478 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Gm11238F2Z478 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Gm11238F2Z478 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Gm11238F2Z478 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.39■■□□□ 1.49
Gm11238F2Z478 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Gm11238F2Z478 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Gm11238F2Z478 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.38■■□□□ 1.49
Gm11238F2Z478 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Gm11238F2Z478 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Gm11238F2Z478 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.37■■□□□ 1.49
Gm11238F2Z478 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.37■■□□□ 1.49
Gm11238F2Z478 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Gm11238F2Z478 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Gm11238F2Z478 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Gm11238F2Z478 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Gm11238F2Z478 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Gm11238F2Z478 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Gm11238F2Z478 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm11238F2Z478 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm11238F2Z478 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm11238F2Z478 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.34■■□□□ 1.49
Gm11238F2Z478 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Gm11238F2Z478 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
Gm11238F2Z478 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.34■■□□□ 1.49
Gm11238F2Z478 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Gm11238F2Z478 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Gm11238F2Z478 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.32■■□□□ 1.48
Gm11238F2Z478 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Gm11238F2Z478 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.32■■□□□ 1.48
Gm11238F2Z478 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Gm11238F2Z478 Gm10420-201ENSMUST00000121713 882 ntBASIC24.31■■□□□ 1.48
Gm11238F2Z478 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Gm11238F2Z478 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Gm11238F2Z478 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Gm11238F2Z478 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Gm11238F2Z478 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Gm11238F2Z478 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Gm11238F2Z478 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Gm11238F2Z478 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.28■■□□□ 1.48
Gm11238F2Z478 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Gm11238F2Z478 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gm11238F2Z478 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Gm11238F2Z478 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Gm11238F2Z478 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.27■■□□□ 1.48
Gm11238F2Z478 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Gm11238F2Z478 Gm44428-201ENSMUST00000204474 874 ntBASIC24.26■■□□□ 1.47
Gm11238F2Z478 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Gm11238F2Z478 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.26■■□□□ 1.47
Gm11238F2Z478 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Gm11238F2Z478 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Gm11238F2Z478 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms