Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC11.72□□□□□ -0.53
Rnf213E9Q555 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC11.72□□□□□ -0.53
Rnf213E9Q555 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC11.72□□□□□ -0.53
Rnf213E9Q555 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf213E9Q555 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf213E9Q555 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf213E9Q555 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf213E9Q555 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf213E9Q555 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC11.71□□□□□ -0.54
Rnf213E9Q555 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Rnf213E9Q555 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf213E9Q555 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf213E9Q555 Nsd1-203ENSMUST00000224156 1149 ntBASIC11.7□□□□□ -0.54
Rnf213E9Q555 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.7□□□□□ -0.54
Rnf213E9Q555 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf213E9Q555 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf213E9Q555 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf213E9Q555 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Rnf213E9Q555 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf213E9Q555 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf213E9Q555 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf213E9Q555 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf213E9Q555 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf213E9Q555 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf213E9Q555 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC11.68□□□□□ -0.54
Rnf213E9Q555 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf213E9Q555 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Rnf213E9Q555 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf213E9Q555 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC11.68□□□□□ -0.54
Rnf213E9Q555 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf213E9Q555 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf213E9Q555 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf213E9Q555 AC122317.2-201ENSMUST00000218708 1248 ntBASIC11.68□□□□□ -0.54
Rnf213E9Q555 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf213E9Q555 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Rnf213E9Q555 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rnf213E9Q555 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf213E9Q555 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf213E9Q555 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf213E9Q555 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf213E9Q555 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf213E9Q555 Gm42501-201ENSMUST00000200220 1026 ntBASIC11.66□□□□□ -0.54
Rnf213E9Q555 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rnf213E9Q555 Gm45444-201ENSMUST00000211394 898 ntBASIC11.66□□□□□ -0.54
Rnf213E9Q555 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf213E9Q555 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf213E9Q555 Gm43566-201ENSMUST00000196851 808 ntBASIC11.66□□□□□ -0.54
Rnf213E9Q555 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC11.65□□□□□ -0.54
Rnf213E9Q555 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf213E9Q555 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rnf213E9Q555 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf213E9Q555 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Rnf213E9Q555 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf213E9Q555 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC11.65□□□□□ -0.55
Rnf213E9Q555 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf213E9Q555 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rnf213E9Q555 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf213E9Q555 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf213E9Q555 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf213E9Q555 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC11.64□□□□□ -0.55
Rnf213E9Q555 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.64□□□□□ -0.55
Rnf213E9Q555 Gm6658-202ENSMUST00000209493 1885 ntBASIC11.64□□□□□ -0.55
Rnf213E9Q555 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rnf213E9Q555 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC11.63□□□□□ -0.55
Rnf213E9Q555 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf213E9Q555 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf213E9Q555 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf213E9Q555 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf213E9Q555 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf213E9Q555 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf213E9Q555 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf213E9Q555 Gm9905-201ENSMUST00000065740 1845 ntBASIC11.62□□□□□ -0.55
Rnf213E9Q555 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rnf213E9Q555 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf213E9Q555 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf213E9Q555 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf213E9Q555 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf213E9Q555 Gm37136-201ENSMUST00000194368 194 ntBASIC11.61□□□□□ -0.55
Rnf213E9Q555 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf213E9Q555 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf213E9Q555 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf213E9Q555 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rnf213E9Q555 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rnf213E9Q555 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf213E9Q555 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf213E9Q555 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf213E9Q555 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Rnf213E9Q555 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf213E9Q555 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf213E9Q555 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf213E9Q555 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf213E9Q555 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf213E9Q555 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf213E9Q555 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf213E9Q555 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf213E9Q555 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf213E9Q555 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rnf213E9Q555 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC11.58□□□□□ -0.56
Rnf213E9Q555 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf213E9Q555 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms