Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5878E9PUB3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5878E9PUB3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm5878E9PUB3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5878E9PUB3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5878E9PUB3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5878E9PUB3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5878E9PUB3 Gm37136-201ENSMUST00000194368 194 ntBASIC17.27■□□□□ 0.36
Gm5878E9PUB3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5878E9PUB3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5878E9PUB3 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.26■□□□□ 0.35
Gm5878E9PUB3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5878E9PUB3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5878E9PUB3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5878E9PUB3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5878E9PUB3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5878E9PUB3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5878E9PUB3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5878E9PUB3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5878E9PUB3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm5878E9PUB3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5878E9PUB3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5878E9PUB3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm5878E9PUB3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm5878E9PUB3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5878E9PUB3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5878E9PUB3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5878E9PUB3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5878E9PUB3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gm5878E9PUB3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5878E9PUB3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.23■□□□□ 0.35
Gm5878E9PUB3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5878E9PUB3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.23■□□□□ 0.35
Gm5878E9PUB3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5878E9PUB3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gm5878E9PUB3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5878E9PUB3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm5878E9PUB3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Gm5878E9PUB3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.2■□□□□ 0.34
Gm5878E9PUB3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5878E9PUB3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Gm5878E9PUB3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Gm5878E9PUB3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5878E9PUB3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5878E9PUB3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5878E9PUB3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.19■□□□□ 0.34
Gm5878E9PUB3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5878E9PUB3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5878E9PUB3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Gm5878E9PUB3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.18■□□□□ 0.34
Gm5878E9PUB3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5878E9PUB3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5878E9PUB3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5878E9PUB3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.17■□□□□ 0.34
Gm5878E9PUB3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5878E9PUB3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm5878E9PUB3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5878E9PUB3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.15■□□□□ 0.34
Gm5878E9PUB3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5878E9PUB3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5878E9PUB3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.15■□□□□ 0.34
Gm5878E9PUB3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm5878E9PUB3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Gm5878E9PUB3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Gm5878E9PUB3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5878E9PUB3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5878E9PUB3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5878E9PUB3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm5878E9PUB3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5878E9PUB3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5878E9PUB3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm5878E9PUB3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5878E9PUB3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5878E9PUB3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5878E9PUB3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm5878E9PUB3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5878E9PUB3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5878E9PUB3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5878E9PUB3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.11■□□□□ 0.33
Gm5878E9PUB3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5878E9PUB3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm5878E9PUB3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5878E9PUB3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5878E9PUB3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5878E9PUB3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5878E9PUB3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm5878E9PUB3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5878E9PUB3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5878E9PUB3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5878E9PUB3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5878E9PUB3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm5878E9PUB3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5878E9PUB3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5878E9PUB3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5878E9PUB3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm5878E9PUB3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm5878E9PUB3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.08■□□□□ 0.32
Gm5878E9PUB3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm5878E9PUB3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5878E9PUB3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms